62 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102296098	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	LOC102312513	Transcription factor SOX. (376 aa)
	ENSHBUP00000013736	TLE_N domain-containing protein. (159 aa)
	ENSHBUP00000013881	HMG box domain-containing protein. (303 aa)
	LOC102306068	SRY-box transcription factor 17. (397 aa)
	LOC102305764	SRY-box transcription factor 32. (307 aa)
	LOC102290443	SRY-box transcription factor 9b. (480 aa)
	sox11	Transcription factor SOX. (363 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	cby1	Chibby homolog 1 (Drosophila). (134 aa)
	LOC102305055	HMG box domain-containing protein. (498 aa)
	LOC102302403	SRY-box transcription factor 1a. (344 aa)
	LOC102296013	Uncharacterized protein. (537 aa)
	LOC102301101	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (467 aa)
	LOC102306912	TLE family member 5, transcriptional modulator. (203 aa)
	tle5	TLE family member 5, transcriptional modulator. (203 aa)
	sox4	Transcription factor SOX. (347 aa)
	TLE4	Uncharacterized protein. (783 aa)
	ENSHBUP00000009952	PH domain-containing protein. (146 aa)
	tcf7l2	Transcription factor 7 like 2. (631 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	LOC102297192	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (482 aa)
	sox21	SRY-box transcription factor 21b. (248 aa)
	tcf7	Transcription factor 7. (409 aa)
	zbtb44	Zinc finger and BTB domain containing 44. (669 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	lef1	Lymphoid enhancer-binding factor 1. (398 aa)
	ENSHBUP00000030453	Uncharacterized protein. (102 aa)
	sox3	SRY-box transcription factor 3. (300 aa)
	sox7	SRY-box transcription factor 7. (483 aa)
	tcf7l1	Transcription factor 7 like 1b. (581 aa)
	LOC102294648	Uncharacterized protein. (772 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC102310211	TLE family member 2, transcriptional corepressor b. (769 aa)
	LOC102310925	TLE family member 2, transcriptional corepressor a. (784 aa)
	xpo1	Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
	LOC102290460	HMG box domain-containing protein. (241 aa)
	sox13	SRY-box transcription factor 13. (564 aa)
	ENSHBUP00000024173	annotation not available (249 aa)
	LOC102313343	SRY-box transcription factor 9a. (500 aa)
	LOC106633732	SRY-box transcription factor 19b. (307 aa)
	ENSHBUP00000023750	SRY-box transcription factor 2. (242 aa)
	LOC102288551	HMG box domain-containing protein. (362 aa)
	LOC102307482	X-linked inhibitor of apoptosis. (421 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2536 aa)
	sox8	SRY-box transcription factor 8. (464 aa)
	LOC102295576	Uncharacterized protein. (563 aa)
	ENSHBUP00000020106	Transcription factor SOX. (372 aa)
	sox10	SRY-box transcription factor 10. (475 aa)
	ubb	Ubiquitin-like domain-containing protein. (54 aa)
	hmgxb4	HMG box domain containing 4a. (591 aa)
	ctnnbip1	Catenin, beta interacting protein 1. (81 aa)
	LOC102296990	Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
	sox5	SRY-box transcription factor 5. (787 aa)
	LOC102305578	HMG box domain-containing protein. (580 aa)
	LOC102298480	TLE family member 3, transcriptional corepressor. (766 aa)
	LOC102311222	SRY-box transcription factor 8a. (479 aa)
	sox6	HMG box domain-containing protein. (776 aa)
	ENSHBUP00000010363	HMG box domain-containing protein. (172 aa)
	SOX14	SRY-box transcription factor 14. (238 aa)
	LOC102314081	SRY-box transcription factor 6. (778 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000009952	LOC102296098	ENSHBUP00000009952	ENSHBUP00000011927	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.823
ENSHBUP00000009952	LOC102297192	ENSHBUP00000009952	ENSHBUP00000034621	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.809
ENSHBUP00000009952	LOC102301101	ENSHBUP00000009952	ENSHBUP00000005571	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.821
ENSHBUP00000009952	LOC102307482	ENSHBUP00000009952	ENSHBUP00000022588	PH domain-containing protein.	X-linked inhibitor of apoptosis.	0.613
ENSHBUP00000009952	LOC102314666	ENSHBUP00000009952	ENSHBUP00000031002	PH domain-containing protein.	Ubiquitin-like domain-containing protein.	0.410
ENSHBUP00000009952	ctnnb1	ENSHBUP00000009952	ENSHBUP00000035228	PH domain-containing protein.	Catenin (cadherin-associated protein), beta 1.	0.767
ENSHBUP00000009952	uba52	ENSHBUP00000009952	ENSHBUP00000026409	PH domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.425
ENSHBUP00000009952	ubb	ENSHBUP00000009952	ENSHBUP00000019517	PH domain-containing protein.	Ubiquitin-like domain-containing protein.	0.425
ENSHBUP00000010363	ENSHBUP00000013736	ENSHBUP00000010363	ENSHBUP00000013736	HMG box domain-containing protein.	TLE_N domain-containing protein.	0.741
ENSHBUP00000010363	ENSHBUP00000020106	ENSHBUP00000010363	ENSHBUP00000020106	HMG box domain-containing protein.	Transcription factor SOX.	0.574
ENSHBUP00000010363	ENSHBUP00000023750	ENSHBUP00000010363	ENSHBUP00000023750	HMG box domain-containing protein.	SRY-box transcription factor 2.	0.547
ENSHBUP00000010363	ENSHBUP00000024173	ENSHBUP00000010363	ENSHBUP00000024173	HMG box domain-containing protein.	annotation not available	0.547
ENSHBUP00000010363	ENSHBUP00000030453	ENSHBUP00000010363	ENSHBUP00000030453	HMG box domain-containing protein.	Uncharacterized protein.	0.749
ENSHBUP00000010363	LOC102288551	ENSHBUP00000010363	ENSHBUP00000023666	HMG box domain-containing protein.	HMG box domain-containing protein.	0.510
ENSHBUP00000010363	LOC102290443	ENSHBUP00000010363	ENSHBUP00000001415	HMG box domain-containing protein.	SRY-box transcription factor 9b.	0.510
ENSHBUP00000010363	LOC102290460	ENSHBUP00000010363	ENSHBUP00000025161	HMG box domain-containing protein.	HMG box domain-containing protein.	0.547
ENSHBUP00000010363	LOC102294648	ENSHBUP00000010363	ENSHBUP00000027873	HMG box domain-containing protein.	Uncharacterized protein.	0.749
ENSHBUP00000010363	LOC102295576	ENSHBUP00000010363	ENSHBUP00000020226	HMG box domain-containing protein.	Uncharacterized protein.	0.617
ENSHBUP00000010363	LOC102296013	ENSHBUP00000010363	ENSHBUP00000005250	HMG box domain-containing protein.	Uncharacterized protein.	0.503
ENSHBUP00000010363	LOC102298480	ENSHBUP00000010363	ENSHBUP00000015897	HMG box domain-containing protein.	TLE family member 3, transcriptional corepressor.	0.831