STRINGSTRING
sqstm1 sqstm1 vdac1 vdac1 LOC102305953 LOC102305953 LOC102298528 LOC102298528 atg12 atg12 prkn prkn tomm6 tomm6 map1lc3b map1lc3b ENSHBUP00000008494 ENSHBUP00000008494 ENSHBUP00000008457 ENSHBUP00000008457 tomm5 tomm5 mfn2 mfn2 LOC102299221 LOC102299221 rps27a rps27a tomm40 tomm40 TOMM7 TOMM7 TOMM20 TOMM20 mfn1 mfn1 tomm22 tomm22 mterf3 mterf3 pink1 pink1 map1lc3a map1lc3a tomm70 tomm70 atg5 atg5 LOC102314666 LOC102314666
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sqstm1Sequestosome 1. (426 aa)
vdac1Voltage-dependent anion channel 1. (316 aa)
LOC102305953Translocase of outer mitochondrial membrane 40 homolog, like. (341 aa)
LOC102298528Translocase of outer mitochondrial membrane 20b. (146 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (432 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (126 aa)
ENSHBUP00000008494Fzo_mitofusin domain-containing protein. (469 aa)
ENSHBUP00000008457Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (317 aa)
tomm5Translocase of outer mitochondrial membrane 5 homolog (yeast). (51 aa)
mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (759 aa)
LOC102299221Uncharacterized protein. (331 aa)
rps27aRibosomal protein S27a. (156 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (322 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
mterf3Mitochondrial transcription termination factor 3. (428 aa)
pink1PTEN induced kinase 1. (574 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (122 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
LOC102314666Ubiquitin-like domain-containing protein. (131 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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