47 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (379 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (636 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (400 aa)
	rnf103	Ring finger protein 103. (697 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	canx	Calnexin. (644 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (338 aa)
	edem3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (888 aa)
	calr3	Calreticulin. (422 aa)
	pdia3	Protein disulfide-isomerase. (492 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	marchf11	Membrane-associated ring finger (C3HC4) 11. (349 aa)
	edem2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (561 aa)
	LOC102308977	RING-CH-type domain-containing protein. (248 aa)
	LOC102292797	Zgc:136908; Belongs to the AAA ATPase family. (806 aa)
	ENSHBUP00000018381	Ring finger protein 139. (498 aa)
	SPATA5	Spermatogenesis associated 5. (901 aa)
	LOC102308154	Calreticulin. (435 aa)
	marchf6	Membrane-associated ring finger (C3HC4) 6. (915 aa)
	ubb	Ubiquitin-like domain-containing protein. (54 aa)
	uggt2	UDP-glucose glycoprotein glucosyltransferase 2. (1522 aa)
	LOC102306282	RING-CH-type domain-containing protein. (256 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (287 aa)
	LOC102313201	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (857 aa)
	clgn	Calmegin. (669 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (797 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1560 aa)
	LOC102309557	RING-CH-type domain-containing protein. (552 aa)
	LOC102308862	Membrane-associated ring finger (C3HC4) 9. (360 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	engase	Endo-beta-N-acetylglucosaminidase. (708 aa)
	marchf2	Membrane-associated ring finger (C3HC4) 2. (253 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (252 aa)
	mogs	Mannosyl-oligosaccharide glucosidase. (844 aa)
	man1b1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (467 aa)
	LOC102312386	RING-CH-type domain-containing protein. (867 aa)
	marchf1	Membrane-associated ring finger (C3HC4) 1. (572 aa)
	ubxn1	UBX domain protein 1. (311 aa)
	ganab	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (951 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	LOC102296215	Calreticulin. (421 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	ngly1	N-glycanase 1. (637 aa)
	amfr	Autocrine motility factor receptor b. (641 aa)
	pdia4	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (639 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000018381	LOC102292797	ENSHBUP00000018381	ENSHBUP00000013417	Ring finger protein 139.	Zgc:136908; Belongs to the AAA ATPase family.	0.789
ENSHBUP00000018381	LOC102312386	ENSHBUP00000018381	ENSHBUP00000028153	Ring finger protein 139.	RING-CH-type domain-containing protein.	0.585
ENSHBUP00000018381	LOC102314666	ENSHBUP00000018381	ENSHBUP00000031002	Ring finger protein 139.	Ubiquitin-like domain-containing protein.	0.559
ENSHBUP00000018381	RAD23B	ENSHBUP00000018381	ENSHBUP00000016595	Ring finger protein 139.	RAD23 homolog B, nucleotide excision repair protein.	0.687
ENSHBUP00000018381	SPATA5	ENSHBUP00000018381	ENSHBUP00000018457	Ring finger protein 139.	Spermatogenesis associated 5.	0.789
ENSHBUP00000018381	derl1	ENSHBUP00000018381	ENSHBUP00000027033	Ring finger protein 139.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.841
ENSHBUP00000018381	marchf6	ENSHBUP00000018381	ENSHBUP00000019165	Ring finger protein 139.	Membrane-associated ring finger (C3HC4) 6.	0.585
ENSHBUP00000018381	ngly1	ENSHBUP00000018381	ENSHBUP00000031803	Ring finger protein 139.	N-glycanase 1.	0.781
ENSHBUP00000018381	psmc1	ENSHBUP00000018381	ENSHBUP00000028974	Ring finger protein 139.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.657
ENSHBUP00000018381	rps27a	ENSHBUP00000018381	ENSHBUP00000002167	Ring finger protein 139.	Ribosomal protein S27a.	0.793
ENSHBUP00000018381	spata5l1	ENSHBUP00000018381	ENSHBUP00000028532	Ring finger protein 139.	Spermatogenesis associated 5-like 1.	0.789
ENSHBUP00000018381	uba52	ENSHBUP00000018381	ENSHBUP00000026409	Ring finger protein 139.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.713
ENSHBUP00000018381	ubb	ENSHBUP00000018381	ENSHBUP00000019517	Ring finger protein 139.	Ubiquitin-like domain-containing protein.	0.713
ENSHBUP00000018381	ubxn1	ENSHBUP00000018381	ENSHBUP00000028367	Ring finger protein 139.	UBX domain protein 1.	0.742
ENSHBUP00000018381	vcp	ENSHBUP00000018381	ENSHBUP00000008673	Ring finger protein 139.	Valosin containing protein; Belongs to the AAA ATPase family.	0.789
LOC102292797	ENSHBUP00000018381	ENSHBUP00000013417	ENSHBUP00000018381	Zgc:136908; Belongs to the AAA ATPase family.	Ring finger protein 139.	0.789
LOC102292797	LOC102306282	ENSHBUP00000013417	ENSHBUP00000020229	Zgc:136908; Belongs to the AAA ATPase family.	RING-CH-type domain-containing protein.	0.554
LOC102292797	LOC102308862	ENSHBUP00000013417	ENSHBUP00000026401	Zgc:136908; Belongs to the AAA ATPase family.	Membrane-associated ring finger (C3HC4) 9.	0.554
LOC102292797	LOC102308977	ENSHBUP00000013417	ENSHBUP00000013058	Zgc:136908; Belongs to the AAA ATPase family.	RING-CH-type domain-containing protein.	0.554
LOC102292797	LOC102309557	ENSHBUP00000013417	ENSHBUP00000025211	Zgc:136908; Belongs to the AAA ATPase family.	RING-CH-type domain-containing protein.	0.554