38 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIP4K2B	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. (412 aa)
	meaf6	MYST/Esa1-associated factor 6. (203 aa)
	pip4p2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (282 aa)
	LOC102312872	Bromodomain containing 1a. (1247 aa)
	LOC102301101	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (467 aa)
	LOC102311194	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (2171 aa)
	gatad2b	GATA zinc finger domain containing 2B. (649 aa)
	pip4p1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (270 aa)
	gatad2a	GATA zinc finger domain containing 2Ab. (666 aa)
	ing2	Inhibitor of growth protein. (280 aa)
	ENSHBUP00000009952	PH domain-containing protein. (146 aa)
	LOC102290024	Bromodomain and PHD finger containing, 3b. (1254 aa)
	LOC102296098	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	LOC102305625	Bromodomain containing 1b. (1176 aa)
	chd4	Uncharacterized protein. (1812 aa)
	akt1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (473 aa)
	brd9	Bromodomain containing 9. (615 aa)
	ENSHBUP00000014942	Inhibitor of growth family, member 5a. (150 aa)
	ep300	E1A binding protein p300 b. (2764 aa)
	LOC102291041	Chromodomain helicase DNA binding protein 4a. (1861 aa)
	LOC102301393	WD_REPEATS_REGION domain-containing protein. (426 aa)
	brd7	Bromodomain containing 7. (620 aa)
	LOC102297072	GATA zinc finger domain containing 2A. (736 aa)
	brpf1	Uncharacterized protein. (1296 aa)
	ing1	Inhibitor of growth protein. (328 aa)
	LOC102306757	E1A binding protein p300 a. (2600 aa)
	LOC102296334	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (391 aa)
	ENSHBUP00000022490	Bromodomain and PHD finger containing, 3a. (596 aa)
	aire	Autoimmune regulator. (499 aa)
	pip4k2c	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a. (434 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (1804 aa)
	LOC102305636	Retinoblastoma binding protein 4. (424 aa)
	LOC102310951	Chromodomain helicase DNA binding protein 3. (2129 aa)
	LOC102306305	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (251 aa)
	LOC102308375	Retinoblastoma binding protein 4, like. (427 aa)
	LOC102297192	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (482 aa)
	pip4k2a	Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a. (442 aa)
	LOC102301919	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b. (411 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000009952	ENSHBUP00000014942	ENSHBUP00000009952	ENSHBUP00000014942	PH domain-containing protein.	Inhibitor of growth family, member 5a.	0.413
ENSHBUP00000009952	LOC102296098	ENSHBUP00000009952	ENSHBUP00000011927	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.823
ENSHBUP00000009952	LOC102296334	ENSHBUP00000009952	ENSHBUP00000022213	PH domain-containing protein.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.803
ENSHBUP00000009952	LOC102297192	ENSHBUP00000009952	ENSHBUP00000034621	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.809
ENSHBUP00000009952	LOC102301101	ENSHBUP00000009952	ENSHBUP00000005571	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.821
ENSHBUP00000009952	LOC102306757	ENSHBUP00000009952	ENSHBUP00000020755	PH domain-containing protein.	E1A binding protein p300 a.	0.495
ENSHBUP00000009952	akt1	ENSHBUP00000009952	ENSHBUP00000014267	PH domain-containing protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.815
ENSHBUP00000009952	ep300	ENSHBUP00000009952	ENSHBUP00000015535	PH domain-containing protein.	E1A binding protein p300 b.	0.495
ENSHBUP00000009952	meaf6	ENSHBUP00000009952	ENSHBUP00000000478	PH domain-containing protein.	MYST/Esa1-associated factor 6.	0.593
ENSHBUP00000014942	ENSHBUP00000009952	ENSHBUP00000014942	ENSHBUP00000009952	Inhibitor of growth family, member 5a.	PH domain-containing protein.	0.413
ENSHBUP00000014942	ENSHBUP00000022490	ENSHBUP00000014942	ENSHBUP00000022490	Inhibitor of growth family, member 5a.	Bromodomain and PHD finger containing, 3a.	0.861
ENSHBUP00000014942	LOC102290024	ENSHBUP00000014942	ENSHBUP00000011598	Inhibitor of growth family, member 5a.	Bromodomain and PHD finger containing, 3b.	0.861
ENSHBUP00000014942	LOC102291041	ENSHBUP00000014942	ENSHBUP00000016597	Inhibitor of growth family, member 5a.	Chromodomain helicase DNA binding protein 4a.	0.577
ENSHBUP00000014942	LOC102296098	ENSHBUP00000014942	ENSHBUP00000011927	Inhibitor of growth family, member 5a.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.413
ENSHBUP00000014942	LOC102296334	ENSHBUP00000014942	ENSHBUP00000022213	Inhibitor of growth family, member 5a.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.876
ENSHBUP00000014942	LOC102297192	ENSHBUP00000014942	ENSHBUP00000034621	Inhibitor of growth family, member 5a.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.413
ENSHBUP00000014942	LOC102301101	ENSHBUP00000014942	ENSHBUP00000005571	Inhibitor of growth family, member 5a.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.413
ENSHBUP00000014942	LOC102301393	ENSHBUP00000014942	ENSHBUP00000016818	Inhibitor of growth family, member 5a.	WD_REPEATS_REGION domain-containing protein.	0.779
ENSHBUP00000014942	LOC102305625	ENSHBUP00000014942	ENSHBUP00000014043	Inhibitor of growth family, member 5a.	Bromodomain containing 1b.	0.819
ENSHBUP00000014942	LOC102305636	ENSHBUP00000014942	ENSHBUP00000030240	Inhibitor of growth family, member 5a.	Retinoblastoma binding protein 4.	0.779