STRINGSTRING
mmaa mmaa mindy2 mindy2 mindy1 mindy1 mcee mcee pccb pccb mmut mmut
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmaaMetabolism of cobalamin associated A. (408 aa)
mindy2MINDY lysine 48 deubiquitinase 2. (590 aa)
mindy1MINDY lysine 48 deubiquitinase 1. (554 aa)
mceeMethylmalonyl CoA epimerase. (173 aa)
pccbPropionyl-CoA carboxylase subunit beta. (560 aa)
mmutMethylmalonyl CoA mutase. (754 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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