38 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GOLGA7B	Golgin A7 family, member Ba. (158 aa)
	golga7b	Golgin A7 family member B. (210 aa)
	LOC102294720	Golgin A7. (144 aa)
	bcl2l1	BCL2 like 1. (233 aa)
	LOC102288514	Peptidase_S9 domain-containing protein. (360 aa)
	ZDHHC14	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (510 aa)
	churc1	Churchill domain containing 1. (112 aa)
	ENSHBUP00000031114	ADP-ribosylation factor-like 2. (138 aa)
	zdhhc9	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (382 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	LOC102291623	Ras converting CAAX endopeptidase 1a. (221 aa)
	LOC102311729	BH4_2 domain-containing protein. (226 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (217 aa)
	GOLGA7	Golgin A7. (143 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	LOC102294639	Uncharacterized protein. (155 aa)
	pde6d	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] (136 aa)
	ENSHBUP00000023112	Ras converting CAAX endopeptidase 1b. (228 aa)
	usp36	Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. (1165 aa)
	ENSHBUP00000019482	USP domain-containing protein; Belongs to the peptidase C19 family. (222 aa)
	zdhhc18	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (464 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (922 aa)
	icmt	Protein-S-isoprenylcysteine O-methyltransferase. (291 aa)
	LOC102307400	Zgc:55558. (187 aa)
	LOC102293025	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (434 aa)
	lypla1	Lysophospholipase 1. (232 aa)
	LOC102295479	Abhydrolase domain containing 17C. (94 aa)
	abhd17b	Abhydrolase domain containing 17B. (288 aa)
	zdhhc14	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (509 aa)
	LOC102311373	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (474 aa)
	ENSHBUP00000008412	DDE_Tnp_1_7 domain-containing protein. (441 aa)
	ENSHBUP00000007152	Erf4 domain-containing protein. (163 aa)
	LOC102289587	DDE_Tnp_1_7 domain-containing protein. (578 aa)
	prkcq	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (720 aa)
	LOC102288803	Abhydrolase domain containing 17A. (321 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	fnta	Farnesyltransferase, CAAX box, alpha. (367 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSHBUP00000007152	ENSHBUP00000018081	ENSHBUP00000007152	Cold shock domain containing E1, RNA-binding.	Erf4 domain-containing protein.	0.478
CSDE1	ENSHBUP00000023112	ENSHBUP00000018081	ENSHBUP00000023112	Cold shock domain containing E1, RNA-binding.	Ras converting CAAX endopeptidase 1b.	0.625
CSDE1	ENSHBUP00000031114	ENSHBUP00000018081	ENSHBUP00000031114	Cold shock domain containing E1, RNA-binding.	ADP-ribosylation factor-like 2.	0.606
CSDE1	GOLGA7	ENSHBUP00000018081	ENSHBUP00000028805	Cold shock domain containing E1, RNA-binding.	Golgin A7.	0.478
CSDE1	GOLGA7B	ENSHBUP00000018081	ENSHBUP00000010691	Cold shock domain containing E1, RNA-binding.	Golgin A7 family, member Ba.	0.478
CSDE1	LOC102288514	ENSHBUP00000018081	ENSHBUP00000033870	Cold shock domain containing E1, RNA-binding.	Peptidase_S9 domain-containing protein.	0.441
CSDE1	LOC102288803	ENSHBUP00000018081	ENSHBUP00000003471	Cold shock domain containing E1, RNA-binding.	Abhydrolase domain containing 17A.	0.441
CSDE1	LOC102291623	ENSHBUP00000018081	ENSHBUP00000029844	Cold shock domain containing E1, RNA-binding.	Ras converting CAAX endopeptidase 1a.	0.625
CSDE1	LOC102293025	ENSHBUP00000018081	ENSHBUP00000015355	Cold shock domain containing E1, RNA-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.661
CSDE1	LOC102294639	ENSHBUP00000018081	ENSHBUP00000025820	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.441
CSDE1	LOC102294720	ENSHBUP00000018081	ENSHBUP00000034573	Cold shock domain containing E1, RNA-binding.	Golgin A7.	0.478
CSDE1	LOC102295479	ENSHBUP00000018081	ENSHBUP00000013882	Cold shock domain containing E1, RNA-binding.	Abhydrolase domain containing 17C.	0.441
CSDE1	LOC102311373	ENSHBUP00000018081	ENSHBUP00000008636	Cold shock domain containing E1, RNA-binding.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.514
CSDE1	LOC102311729	ENSHBUP00000018081	ENSHBUP00000029517	Cold shock domain containing E1, RNA-binding.	BH4_2 domain-containing protein.	0.655
CSDE1	LOC102314666	ENSHBUP00000018081	ENSHBUP00000031002	Cold shock domain containing E1, RNA-binding.	Ubiquitin-like domain-containing protein.	0.689
CSDE1	ZDHHC14	ENSHBUP00000018081	ENSHBUP00000032449	Cold shock domain containing E1, RNA-binding.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.514
CSDE1	abhd17b	ENSHBUP00000018081	ENSHBUP00000011776	Cold shock domain containing E1, RNA-binding.	Abhydrolase domain containing 17B.	0.441
CSDE1	bcl2l1	ENSHBUP00000018081	ENSHBUP00000033891	Cold shock domain containing E1, RNA-binding.	BCL2 like 1.	0.655
CSDE1	churc1	ENSHBUP00000018081	ENSHBUP00000031495	Cold shock domain containing E1, RNA-binding.	Churchill domain containing 1.	0.661
CSDE1	fnta	ENSHBUP00000018081	ENSHBUP00000000404	Cold shock domain containing E1, RNA-binding.	Farnesyltransferase, CAAX box, alpha.	0.688