60 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102312375	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (724 aa)
	msi1	Uncharacterized protein. (348 aa)
	vim	Vimentin like; Belongs to the intermediate filament family. (455 aa)
	LOC102306398	RRM domain-containing protein. (330 aa)
	LOC102296660	Rho related BTB domain containing 4. (734 aa)
	LOC102314562	Tropomodulin 2. (346 aa)
	myo6	Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1225 aa)
	ENSHBUP00000000688	CID domain-containing protein. (194 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (535 aa)
	pde5a	Phosphodiesterase. (796 aa)
	cpsf6	Cleavage and polyadenylation specific factor 6. (586 aa)
	LOC102290439	RRM domain-containing protein. (267 aa)
	rnf20	E3 ubiquitin protein ligase. (1027 aa)
	TWF2	Twinfilin actin-binding protein 2a. (352 aa)
	tra2b	Transformer 2 beta homolog. (283 aa)
	LOC102305479	Uncharacterized protein. (381 aa)
	scaf4	SR-related CTD-associated factor 4a. (1144 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1370 aa)
	LOC102308898	RALY RNA binding protein like. (307 aa)
	cops4	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (321 aa)
	cops2	COP9 signalosome subunit 2. (443 aa)
	LOC102293972	Uncharacterized protein. (404 aa)
	LOC102294683	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	ralyl	RRM domain-containing protein. (292 aa)
	LOC102307906	Uncharacterized protein. (209 aa)
	stk38	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (470 aa)
	rbbp6	Uncharacterized protein. (1680 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1376 aa)
	LOC102299797	Actin, beta 1. (375 aa)
	tra2a	Transformer 2 alpha homolog. (297 aa)
	cct7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (567 aa)
	twf1	Twinfilin actin-binding protein 1a. (350 aa)
	LOC102309294	RRM domain-containing protein. (325 aa)
	hsp90ab1	Heat shock protein 90, alpha (cytosolic), class B member 1. (725 aa)
	SCAF8	SR-related CTD associated factor 8. (1385 aa)
	gps1	G protein pathway suppressor 1. (487 aa)
	LOC102309626	Uncharacterized protein. (1807 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	spen	Spen family transcriptional repressor. (3565 aa)
	ENSHBUP00000018828	Uncharacterized protein. (74 aa)
	raly	RALY heterogeneous nuclear ribonucleoprotein. (286 aa)
	MSI1	Musashi RNA binding protein 1. (351 aa)
	LOC102293583	Uncharacterized protein. (270 aa)
	cirbp	Cold inducible RNA binding protein b. (183 aa)
	LOC102312058	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (729 aa)
	LOC102298846	Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1253 aa)
	LOC102289472	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (225 aa)
	LOC102292004	Si:ch1073-335m2.2. (3196 aa)
	LOC102295829	Twinfilin actin-binding protein 2b. (349 aa)
	CDC37	Cell division cycle 37 homolog (S. cerevisiae). (379 aa)
	msi2	Musashi RNA-binding protein 2a. (407 aa)
	srrm1	Serine/arginine repetitive matrix 1. (784 aa)
	ENSHBUP00000033442	PWI domain-containing protein. (79 aa)
	rbmx	Heterogeneous nuclear ribonucleoprotein G. (391 aa)
	dazap1	DAZ associated protein 1. (451 aa)
	actb	Uncharacterized protein. (377 aa)
	LOC102303345	Uncharacterized protein; Belongs to the actin family. (263 aa)
	LOC102313772	Uncharacterized protein; Belongs to the actin family. (285 aa)
	txnl1	Thioredoxin-like 1. (289 aa)
	rhobtb2	Rho related BTB domain containing 2a. (721 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC37	ENSHBUP00000018828	ENSHBUP00000034036	ENSHBUP00000018828	Cell division cycle 37 homolog (S. cerevisiae).	Uncharacterized protein.	0.938
CDC37	LOC102296660	ENSHBUP00000034036	ENSHBUP00000008470	Cell division cycle 37 homolog (S. cerevisiae).	Rho related BTB domain containing 4.	0.672
CDC37	LOC102312058	ENSHBUP00000034036	ENSHBUP00000020100	Cell division cycle 37 homolog (S. cerevisiae).	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.945
CDC37	LOC102312375	ENSHBUP00000034036	ENSHBUP00000016703	Cell division cycle 37 homolog (S. cerevisiae).	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.945
CDC37	hsp90ab1	ENSHBUP00000034036	ENSHBUP00000032217	Cell division cycle 37 homolog (S. cerevisiae).	Heat shock protein 90, alpha (cytosolic), class B member 1.	0.938
CDC37	rhobtb2	ENSHBUP00000034036	ENSHBUP00000011508	Cell division cycle 37 homolog (S. cerevisiae).	Rho related BTB domain containing 2a.	0.672
CDC37	rock1	ENSHBUP00000034036	ENSHBUP00000026529	Cell division cycle 37 homolog (S. cerevisiae).	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.480
CDC37	rock2	ENSHBUP00000034036	ENSHBUP00000031374	Cell division cycle 37 homolog (S. cerevisiae).	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.480
CUL3	ENSHBUP00000033442	ENSHBUP00000017979	ENSHBUP00000033442	Cullin 3; Belongs to the cullin family.	PWI domain-containing protein.	0.458
CUL3	LOC102290439	ENSHBUP00000017979	ENSHBUP00000004758	Cullin 3; Belongs to the cullin family.	RRM domain-containing protein.	0.410
CUL3	LOC102294683	ENSHBUP00000017979	ENSHBUP00000030288	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.829
CUL3	LOC102296660	ENSHBUP00000017979	ENSHBUP00000008470	Cullin 3; Belongs to the cullin family.	Rho related BTB domain containing 4.	0.858
CUL3	LOC102309626	ENSHBUP00000017979	ENSHBUP00000017691	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.439
CUL3	cct2	ENSHBUP00000017979	ENSHBUP00000002134	Cullin 3; Belongs to the cullin family.	Chaperonin containing TCP1, subunit 2 (beta).	0.663
CUL3	cct7	ENSHBUP00000017979	ENSHBUP00000014398	Cullin 3; Belongs to the cullin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.703
CUL3	cops2	ENSHBUP00000017979	ENSHBUP00000028598	Cullin 3; Belongs to the cullin family.	COP9 signalosome subunit 2.	0.909
CUL3	cops4	ENSHBUP00000017979	ENSHBUP00000028387	Cullin 3; Belongs to the cullin family.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.911
CUL3	gps1	ENSHBUP00000017979	ENSHBUP00000017219	Cullin 3; Belongs to the cullin family.	G protein pathway suppressor 1.	0.955
CUL3	rbbp6	ENSHBUP00000017979	ENSHBUP00000031012	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.439
CUL3	rhobtb2	ENSHBUP00000017979	ENSHBUP00000011508	Cullin 3; Belongs to the cullin family.	Rho related BTB domain containing 2a.	0.858