(10 nodes) Enhancer of polycomb-like network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHBUP00000022490	Bromodomain and PHD finger containing, 3a. (596 aa)
	LOC102312872	Bromodomain containing 1a. (1247 aa)
	jade1	Uncharacterized protein. (959 aa)
	LOC102290024	Bromodomain and PHD finger containing, 3b. (1254 aa)
	LOC102309076	Enhancer of polycomb homolog. (787 aa)
	LOC102305625	Bromodomain containing 1b. (1176 aa)
	jade2	Jade family PHD finger 2. (930 aa)
	brpf1	Uncharacterized protein. (1296 aa)
	jade3	Jade family PHD finger 3. (770 aa)
	LOC102313517	Enhancer of polycomb homolog. (837 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000022490	LOC102305625	ENSHBUP00000022490	ENSHBUP00000014043	Bromodomain and PHD finger containing, 3a.	Bromodomain containing 1b.	0.716
ENSHBUP00000022490	LOC102312872	ENSHBUP00000022490	ENSHBUP00000002714	Bromodomain and PHD finger containing, 3a.	Bromodomain containing 1a.	0.714
ENSHBUP00000022490	brpf1	ENSHBUP00000022490	ENSHBUP00000020036	Bromodomain and PHD finger containing, 3a.	Uncharacterized protein.	0.713
LOC102290024	LOC102305625	ENSHBUP00000011598	ENSHBUP00000014043	Bromodomain and PHD finger containing, 3b.	Bromodomain containing 1b.	0.718
LOC102290024	LOC102312872	ENSHBUP00000011598	ENSHBUP00000002714	Bromodomain and PHD finger containing, 3b.	Bromodomain containing 1a.	0.716
LOC102290024	brpf1	ENSHBUP00000011598	ENSHBUP00000020036	Bromodomain and PHD finger containing, 3b.	Uncharacterized protein.	0.716
LOC102305625	ENSHBUP00000022490	ENSHBUP00000014043	ENSHBUP00000022490	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3a.	0.716
LOC102305625	LOC102290024	ENSHBUP00000014043	ENSHBUP00000011598	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3b.	0.718
LOC102312872	ENSHBUP00000022490	ENSHBUP00000002714	ENSHBUP00000022490	Bromodomain containing 1a.	Bromodomain and PHD finger containing, 3a.	0.714
LOC102312872	LOC102290024	ENSHBUP00000002714	ENSHBUP00000011598	Bromodomain containing 1a.	Bromodomain and PHD finger containing, 3b.	0.716
brpf1	ENSHBUP00000022490	ENSHBUP00000020036	ENSHBUP00000022490	Uncharacterized protein.	Bromodomain and PHD finger containing, 3a.	0.713
brpf1	LOC102290024	ENSHBUP00000020036	ENSHBUP00000011598	Uncharacterized protein.	Bromodomain and PHD finger containing, 3b.	0.716