3 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102303222	Smith-Magenis syndrome chromosome region, candidate 8a. (940 aa)
	flcn	Folliculin. (556 aa)
	smcr8	Smith-Magenis syndrome chromosome region, candidate 8b. (906 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102303222	flcn	ENSHBUP00000015406	ENSHBUP00000029221	Smith-Magenis syndrome chromosome region, candidate 8a.	Folliculin.	0.450
LOC102303222	smcr8	ENSHBUP00000015406	ENSHBUP00000032167	Smith-Magenis syndrome chromosome region, candidate 8a.	Smith-Magenis syndrome chromosome region, candidate 8b.	0.861
flcn	LOC102303222	ENSHBUP00000029221	ENSHBUP00000015406	Folliculin.	Smith-Magenis syndrome chromosome region, candidate 8a.	0.450
flcn	smcr8	ENSHBUP00000029221	ENSHBUP00000032167	Folliculin.	Smith-Magenis syndrome chromosome region, candidate 8b.	0.450
smcr8	LOC102303222	ENSHBUP00000032167	ENSHBUP00000015406	Smith-Magenis syndrome chromosome region, candidate 8b.	Smith-Magenis syndrome chromosome region, candidate 8a.	0.861
smcr8	flcn	ENSHBUP00000032167	ENSHBUP00000029221	Smith-Magenis syndrome chromosome region, candidate 8b.	Folliculin.	0.450