(30 nodes) Ligated ion channel L-glutamate- and glycine-binding site network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	grin2b	Uncharacterized protein. (1716 aa)
	gria2	Glutamate receptor, ionotropic, AMPA 2b. (897 aa)
	LOC102307112	Glutamate receptor, ionotropic, kainate 1b. (857 aa)
	LOC102296684	Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (464 aa)
	grid1	Glutamate receptor, ionotropic, delta 1a. (971 aa)
	LOC102305150	Glutamate receptor, ionotropic, AMPA 3a. (886 aa)
	gria1	Glutamate receptor, ionotropic, AMPA 1a. (919 aa)
	LOC102304038	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b. (1757 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1048 aa)
	grin3b	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1223 aa)
	LOC102300917	Glutamate receptor, ionotropic, kainate 1a. (912 aa)
	grid2	Glutamate receptor, ionotropic, delta 2. (1022 aa)
	LOC102308165	Glutamate receptor, ionotropic, AMPA 4a. (817 aa)
	LOC102292924	Uncharacterized protein. (905 aa)
	GRID1	Glutamate receptor, ionotropic, delta 1b. (698 aa)
	LOC102306605	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b. (1962 aa)
	LOC102300177	Uncharacterized protein. (911 aa)
	grik5	Glutamate receptor, ionotropic, kainate 5. (1071 aa)
	grin2c	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca. (1412 aa)
	LOC102295981	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b. (1590 aa)
	GRIK2	Glutamate ionotropic receptor kainate type subunit 2. (536 aa)
	grin2a	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a. (1537 aa)
	LOC102302700	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a. (964 aa)
	LOC102312799	Uncharacterized protein. (621 aa)
	LOC102295918	Uncharacterized protein. (1399 aa)
	GRIK3	Glutamate ionotropic receptor kainate type subunit 3. (918 aa)
	LOC102291233	Glutamate ionotropic receptor AMPA type subunit 3. (882 aa)
	grik4	Glutamate receptor, ionotropic, kainate 4. (967 aa)
	LOC102307452	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a. (1977 aa)
	LOC102301729	Uncharacterized protein. (753 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GRID1	GRIK2	ENSHBUP00000011326	ENSHBUP00000018265	Glutamate receptor, ionotropic, delta 1b.	Glutamate ionotropic receptor kainate type subunit 2.	0.472
GRID1	GRIK3	ENSHBUP00000011326	ENSHBUP00000026611	Glutamate receptor, ionotropic, delta 1b.	Glutamate ionotropic receptor kainate type subunit 3.	0.472
GRID1	GRIN3A	ENSHBUP00000011326	ENSHBUP00000004190	Glutamate receptor, ionotropic, delta 1b.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.486
GRID1	LOC102291233	ENSHBUP00000011326	ENSHBUP00000027855	Glutamate receptor, ionotropic, delta 1b.	Glutamate ionotropic receptor AMPA type subunit 3.	0.493
GRID1	LOC102292924	ENSHBUP00000011326	ENSHBUP00000011115	Glutamate receptor, ionotropic, delta 1b.	Uncharacterized protein.	0.493
GRID1	LOC102295918	ENSHBUP00000011326	ENSHBUP00000026264	Glutamate receptor, ionotropic, delta 1b.	Uncharacterized protein.	0.547
GRID1	LOC102295981	ENSHBUP00000011326	ENSHBUP00000016574	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	0.547
GRID1	LOC102300177	ENSHBUP00000011326	ENSHBUP00000012488	Glutamate receptor, ionotropic, delta 1b.	Uncharacterized protein.	0.472
GRID1	LOC102300917	ENSHBUP00000011326	ENSHBUP00000006688	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, kainate 1a.	0.472
GRID1	LOC102301729	ENSHBUP00000011326	ENSHBUP00000033576	Glutamate receptor, ionotropic, delta 1b.	Uncharacterized protein.	0.479
GRID1	LOC102302700	ENSHBUP00000011326	ENSHBUP00000024288	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	0.480
GRID1	LOC102304038	ENSHBUP00000011326	ENSHBUP00000003242	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.	0.547
GRID1	LOC102305150	ENSHBUP00000011326	ENSHBUP00000002254	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, AMPA 3a.	0.493
GRID1	LOC102306605	ENSHBUP00000011326	ENSHBUP00000012062	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b.	0.547
GRID1	LOC102307112	ENSHBUP00000011326	ENSHBUP00000000631	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, kainate 1b.	0.472
GRID1	LOC102307452	ENSHBUP00000011326	ENSHBUP00000032962	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a.	0.547
GRID1	LOC102308165	ENSHBUP00000011326	ENSHBUP00000010424	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, AMPA 4a.	0.493
GRID1	LOC102312799	ENSHBUP00000011326	ENSHBUP00000026250	Glutamate receptor, ionotropic, delta 1b.	Uncharacterized protein.	0.554
GRID1	gria1	ENSHBUP00000011326	ENSHBUP00000002277	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, AMPA 1a.	0.493
GRID1	gria2	ENSHBUP00000011326	ENSHBUP00000000087	Glutamate receptor, ionotropic, delta 1b.	Glutamate receptor, ionotropic, AMPA 2b.	0.554