(48 nodes) Reverse transcriptase/Diguanylate cyclase domain, and Polo-like kinase mediated events network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000000510	Uncharacterized protein. (1510 aa)
	lin37	Lin-37 DREAM MuvB core complex component. (242 aa)
	ENSACLP00000000672	Uncharacterized protein. (1579 aa)
	ENSACLP00000001792	Lin-52 DREAM MuvB core complex component. (116 aa)
	ENSACLP00000001816	Uncharacterized protein. (1119 aa)
	ENSACLP00000002230	Uncharacterized protein. (1517 aa)
	ENSACLP00000003155	Uncharacterized protein. (1372 aa)
	ENSACLP00000003191	Integrase catalytic domain-containing protein. (1513 aa)
	ENSACLP00000003981	Uncharacterized protein. (1310 aa)
	LOC113008246	Uncharacterized protein. (1757 aa)
	ENSACLP00000006420	Uncharacterized protein. (1502 aa)
	ENSACLP00000011258	Uncharacterized protein. (1126 aa)
	LOC113023575	Uncharacterized protein. (1136 aa)
	ENSACLP00000012790	Uncharacterized protein. (1122 aa)
	LOC113021785	Uncharacterized protein. (1868 aa)
	ENSACLP00000019368	Uncharacterized protein. (1500 aa)
	ENSACLP00000019467	Uncharacterized protein. (1310 aa)
	ENSACLP00000019943	Uncharacterized protein. (1597 aa)
	ENSACLP00000020113	Uncharacterized protein. (1500 aa)
	ENSACLP00000020189	Uncharacterized protein. (1708 aa)
	ENSACLP00000021497	Uncharacterized protein. (1461 aa)
	ENSACLP00000021771	Uncharacterized protein. (1299 aa)
	ENSACLP00000021860	Uncharacterized protein. (1579 aa)
	ENSACLP00000022622	Uncharacterized protein. (1870 aa)
	lin9	Lin-9 DREAM MuvB core complex component. (499 aa)
	ENSACLP00000025368	Uncharacterized protein. (993 aa)
	ENSACLP00000026189	Uncharacterized protein. (1579 aa)
	LOC113009745	Fork-head domain-containing protein. (757 aa)
	ENSACLP00000026535	Uncharacterized protein. (1504 aa)
	ENSACLP00000026711	Uncharacterized protein. (942 aa)
	ENSACLP00000027126	Uncharacterized protein. (1158 aa)
	ENSACLP00000027709	Forkhead box M1. (581 aa)
	FOXM1	Forkhead box M1. (495 aa)
	ENSACLP00000029318	Uncharacterized protein. (1470 aa)
	ENSACLP00000029584	Uncharacterized protein. (1464 aa)
	MYBL2	Uncharacterized protein. (719 aa)
	ENSACLP00000031757	Uncharacterized protein. (1503 aa)
	ENSACLP00000035601	V-myb avian myeloblastosis viral oncogene homolog-like 2b. (591 aa)
	ENSACLP00000036235	Uncharacterized protein. (822 aa)
	ENSACLP00000036424	Integrase catalytic domain-containing protein. (681 aa)
	lin54	Lin-54 DREAM MuvB core complex component. (805 aa)
	mybl1	V-myb avian myeloblastosis viral oncogene homolog-like 1. (772 aa)
	ENSACLP00000038817	Uncharacterized protein. (1245 aa)
	ENSACLP00000040507	Uncharacterized protein. (1575 aa)
	ENSACLP00000040993	Uncharacterized protein. (1557 aa)
	ENSACLP00000041008	Uncharacterized protein. (1190 aa)
	ENSACLP00000041138	Integrase catalytic domain-containing protein. (850 aa)
	ENSACLP00000041186	Uncharacterized protein. (1101 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000000510	ENSACLP00000001792	ENSACLP00000000510	ENSACLP00000001792	Uncharacterized protein.	Lin-52 DREAM MuvB core complex component.	0.499
ENSACLP00000000510	lin54	ENSACLP00000000510	ENSACLP00000037499	Uncharacterized protein.	Lin-54 DREAM MuvB core complex component.	0.494
ENSACLP00000000510	lin9	ENSACLP00000000510	ENSACLP00000023009	Uncharacterized protein.	Lin-9 DREAM MuvB core complex component.	0.493
ENSACLP00000000672	ENSACLP00000001792	ENSACLP00000000672	ENSACLP00000001792	Uncharacterized protein.	Lin-52 DREAM MuvB core complex component.	0.499
ENSACLP00000000672	lin54	ENSACLP00000000672	ENSACLP00000037499	Uncharacterized protein.	Lin-54 DREAM MuvB core complex component.	0.494
ENSACLP00000000672	lin9	ENSACLP00000000672	ENSACLP00000023009	Uncharacterized protein.	Lin-9 DREAM MuvB core complex component.	0.493
ENSACLP00000001792	ENSACLP00000000510	ENSACLP00000001792	ENSACLP00000000510	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000000672	ENSACLP00000001792	ENSACLP00000000672	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000001816	ENSACLP00000001792	ENSACLP00000001816	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000002230	ENSACLP00000001792	ENSACLP00000002230	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000003155	ENSACLP00000001792	ENSACLP00000003155	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000003191	ENSACLP00000001792	ENSACLP00000003191	Lin-52 DREAM MuvB core complex component.	Integrase catalytic domain-containing protein.	0.499
ENSACLP00000001792	ENSACLP00000003981	ENSACLP00000001792	ENSACLP00000003981	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000006420	ENSACLP00000001792	ENSACLP00000006420	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000011258	ENSACLP00000001792	ENSACLP00000011258	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000012790	ENSACLP00000001792	ENSACLP00000012790	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000019368	ENSACLP00000001792	ENSACLP00000019368	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000019467	ENSACLP00000001792	ENSACLP00000019467	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000019943	ENSACLP00000001792	ENSACLP00000019943	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499
ENSACLP00000001792	ENSACLP00000020113	ENSACLP00000001792	ENSACLP00000020113	Lin-52 DREAM MuvB core complex component.	Uncharacterized protein.	0.499