STRINGSTRING
msh6 msh6 ENSACLP00000003108 ENSACLP00000003108 msh3 msh3 pms2 pms2 ENSACLP00000031218 ENSACLP00000031218
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1441 aa)
ENSACLP00000003108DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (917 aa)
msh3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1115 aa)
pms2PMS1 homolog 2, mismatch repair system component. (861 aa)
ENSACLP00000031218MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (735 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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