STRINGSTRING
ENSACLP00000000023 ENSACLP00000000023 sf3a2 sf3a2 sf3a1 sf3a1 ddx46 ddx46 sf3a3 sf3a3 phf5a phf5a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSACLP00000000023Small nuclear ribonucleoprotein polypeptide A. (247 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
sf3a1Splicing factor 3a, subunit 1. (784 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1100 aa)
sf3a3Splicing factor 3a, subunit 3. (501 aa)
phf5aPHD finger protein 5A. (149 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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