(10 nodes) UBX domain, and AAA ATPase, CDC48 family network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	faf1	Fas (TNFRSF6) associated factor 1. (674 aa)
	ubxn6	UBX domain protein 6. (439 aa)
	nsfl1c	NSFL1 (p97) cofactor (p47). (373 aa)
	ENSACLP00000015815	Si:ch73-147o17.1. (103 aa)
	aspscr1	ASPSCR1 tether for SLC2A4, UBX domain containing. (622 aa)
	ENSACLP00000031811	UBX domain protein 4. (113 aa)
	ENSACLP00000031828	Uncharacterized protein. (79 aa)
	ENSACLP00000035605	Zgc:136908; Belongs to the AAA ATPase family. (721 aa)
	ubxn2a	UBX domain protein 2A. (249 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000015815	ENSACLP00000031811	ENSACLP00000015815	ENSACLP00000031811	Si:ch73-147o17.1.	UBX domain protein 4.	0.833
ENSACLP00000015815	ENSACLP00000031828	ENSACLP00000015815	ENSACLP00000031828	Si:ch73-147o17.1.	Uncharacterized protein.	0.833
ENSACLP00000015815	ENSACLP00000035605	ENSACLP00000015815	ENSACLP00000035605	Si:ch73-147o17.1.	Zgc:136908; Belongs to the AAA ATPase family.	0.940
ENSACLP00000015815	aspscr1	ENSACLP00000015815	ENSACLP00000029284	Si:ch73-147o17.1.	ASPSCR1 tether for SLC2A4, UBX domain containing.	0.855
ENSACLP00000015815	faf1	ENSACLP00000015815	ENSACLP00000004474	Si:ch73-147o17.1.	Fas (TNFRSF6) associated factor 1.	0.857
ENSACLP00000015815	nsfl1c	ENSACLP00000015815	ENSACLP00000010210	Si:ch73-147o17.1.	NSFL1 (p97) cofactor (p47).	0.888
ENSACLP00000015815	ubxn2a	ENSACLP00000015815	ENSACLP00000038039	Si:ch73-147o17.1.	UBX domain protein 2A.	0.925
ENSACLP00000015815	ubxn6	ENSACLP00000015815	ENSACLP00000008301	Si:ch73-147o17.1.	UBX domain protein 6.	0.872
ENSACLP00000015815	vcp	ENSACLP00000015815	ENSACLP00000003493	Si:ch73-147o17.1.	Valosin containing protein; Belongs to the AAA ATPase family.	0.940
ENSACLP00000031811	ENSACLP00000015815	ENSACLP00000031811	ENSACLP00000015815	UBX domain protein 4.	Si:ch73-147o17.1.	0.833
ENSACLP00000031811	ENSACLP00000035605	ENSACLP00000031811	ENSACLP00000035605	UBX domain protein 4.	Zgc:136908; Belongs to the AAA ATPase family.	0.980
ENSACLP00000031811	aspscr1	ENSACLP00000031811	ENSACLP00000029284	UBX domain protein 4.	ASPSCR1 tether for SLC2A4, UBX domain containing.	0.966
ENSACLP00000031811	faf1	ENSACLP00000031811	ENSACLP00000004474	UBX domain protein 4.	Fas (TNFRSF6) associated factor 1.	0.852
ENSACLP00000031811	nsfl1c	ENSACLP00000031811	ENSACLP00000010210	UBX domain protein 4.	NSFL1 (p97) cofactor (p47).	0.908
ENSACLP00000031811	ubxn2a	ENSACLP00000031811	ENSACLP00000038039	UBX domain protein 4.	UBX domain protein 2A.	0.885
ENSACLP00000031811	ubxn6	ENSACLP00000031811	ENSACLP00000008301	UBX domain protein 4.	UBX domain protein 6.	0.990
ENSACLP00000031811	vcp	ENSACLP00000031811	ENSACLP00000003493	UBX domain protein 4.	Valosin containing protein; Belongs to the AAA ATPase family.	0.980
ENSACLP00000031828	ENSACLP00000015815	ENSACLP00000031828	ENSACLP00000015815	Uncharacterized protein.	Si:ch73-147o17.1.	0.833
ENSACLP00000031828	ENSACLP00000035605	ENSACLP00000031828	ENSACLP00000035605	Uncharacterized protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.978
ENSACLP00000031828	aspscr1	ENSACLP00000031828	ENSACLP00000029284	Uncharacterized protein.	ASPSCR1 tether for SLC2A4, UBX domain containing.	0.966