29 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000002279	Uncharacterized protein. (199 aa)
	LOC113019270	Protein kinase domain-containing protein. (748 aa)
	kdm8	Lysine (K)-specific demethylase 8. (408 aa)
	ENSACLP00000007272	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (276 aa)
	fbxl15	F-box and leucine-rich repeat protein 15. (292 aa)
	LOC113031649	Endosulfine alpha a; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family. (169 aa)
	ENSACLP00000006245	Protein kinase domain-containing protein. (194 aa)
	ENSACLP00000005672	Uncharacterized protein. (416 aa)
	ENSACLP00000005618	Usher syndrome 1C. (523 aa)
	LOC113007008	Protein kinase domain-containing protein. (906 aa)
	LOC113021421	Si:dkey-16p21.7. (747 aa)
	ENSACLP00000002218	Protein kinase domain-containing protein. (700 aa)
	fbxl6	F-box domain-containing protein. (565 aa)
	ENSACLP00000001301	Citron rho-interacting serine/threonine kinase b. (1601 aa)
	PPM1D	Protein phosphatase, Mg2+/Mn2+ dependent 1D. (546 aa)
	ENSACLP00000030513	Checkpoint kinase 1; Belongs to the protein kinase superfamily. (469 aa)
	FOXM1	Forkhead box M1. (495 aa)
	ENSACLP00000027709	Forkhead box M1. (581 aa)
	LOC113009745	Fork-head domain-containing protein. (757 aa)
	ENSACLP00000026087	F-box and leucine-rich repeat protein 22. (306 aa)
	LOC113025150	cAMP-regulated phosphoprotein 19b; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family. (116 aa)
	cdc25b	Rhodanese domain-containing protein. (571 aa)
	skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (416 aa)
	ENSACLP00000016349	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1960 aa)
	chek2	Checkpoint kinase 2. (523 aa)
	ARPP19	cAMP regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family. (121 aa)
	LOC113030884	Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (572 aa)
	mastl	Microtubule associated serine/threonine kinase-like. (846 aa)
	ENSACLP00000011383	Tpd52 like 1. (195 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARPP19	mastl	ENSACLP00000012091	ENSACLP00000011981	cAMP regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Microtubule associated serine/threonine kinase-like.	0.852
ENSACLP00000002218	ENSACLP00000002279	ENSACLP00000002218	ENSACLP00000002279	Protein kinase domain-containing protein.	Uncharacterized protein.	0.558
ENSACLP00000002218	cdc25b	ENSACLP00000002218	ENSACLP00000019949	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.828
ENSACLP00000002279	ENSACLP00000002218	ENSACLP00000002279	ENSACLP00000002218	Uncharacterized protein.	Protein kinase domain-containing protein.	0.558
ENSACLP00000002279	cdc25b	ENSACLP00000002279	ENSACLP00000019949	Uncharacterized protein.	Rhodanese domain-containing protein.	0.828
ENSACLP00000005672	skp2	ENSACLP00000005672	ENSACLP00000017697	Uncharacterized protein.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.605
ENSACLP00000006245	ENSACLP00000027709	ENSACLP00000006245	ENSACLP00000027709	Protein kinase domain-containing protein.	Forkhead box M1.	0.648
ENSACLP00000006245	ENSACLP00000030513	ENSACLP00000006245	ENSACLP00000030513	Protein kinase domain-containing protein.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.798
ENSACLP00000006245	FOXM1	ENSACLP00000006245	ENSACLP00000027849	Protein kinase domain-containing protein.	Forkhead box M1.	0.648
ENSACLP00000006245	LOC113009745	ENSACLP00000006245	ENSACLP00000026345	Protein kinase domain-containing protein.	Fork-head domain-containing protein.	0.648
ENSACLP00000006245	cdc25b	ENSACLP00000006245	ENSACLP00000019949	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.970
ENSACLP00000006245	chek2	ENSACLP00000006245	ENSACLP00000013461	Protein kinase domain-containing protein.	Checkpoint kinase 2.	0.629
ENSACLP00000006245	skp2	ENSACLP00000006245	ENSACLP00000017697	Protein kinase domain-containing protein.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.938
ENSACLP00000007272	ENSACLP00000027709	ENSACLP00000007272	ENSACLP00000027709	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Forkhead box M1.	0.648
ENSACLP00000007272	ENSACLP00000030513	ENSACLP00000007272	ENSACLP00000030513	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.798
ENSACLP00000007272	FOXM1	ENSACLP00000007272	ENSACLP00000027849	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Forkhead box M1.	0.648
ENSACLP00000007272	LOC113009745	ENSACLP00000007272	ENSACLP00000026345	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Fork-head domain-containing protein.	0.648
ENSACLP00000007272	cdc25b	ENSACLP00000007272	ENSACLP00000019949	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Rhodanese domain-containing protein.	0.970
ENSACLP00000007272	chek2	ENSACLP00000007272	ENSACLP00000013461	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Checkpoint kinase 2.	0.629
ENSACLP00000007272	skp2	ENSACLP00000007272	ENSACLP00000017697	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.938