STRINGSTRING
LOC113029983 LOC113029983 ENSACLP00000003376 ENSACLP00000003376 rabggtb rabggtb rabggta rabggta ENSACLP00000024769 ENSACLP00000024769 pggt1b pggt1b LOC113015710 LOC113015710 fnta fnta
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113029983Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (619 aa)
ENSACLP00000003376Uncharacterized protein. (445 aa)
rabggtbGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (333 aa)
rabggtaRab geranylgeranyltransferase subunit alpha. (583 aa)
ENSACLP00000024769Zinc finger RNA binding protein. (999 aa)
pggt1bProtein geranylgeranyltransferase type I, beta subunit. (367 aa)
LOC113015710Zinc finger RNA binding protein 2. (1045 aa)
fntaFarnesyltransferase, CAAX box, alpha. (376 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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