21 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mtr	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1269 aa)
	ENSACLP00000040005	MYC binding protein 2. (4559 aa)
	ENSACLP00000039531	Fibronectin type-III domain-containing protein. (110 aa)
	LOC113025456	Zmp:0000000846. (1629 aa)
	tnr	Tenascin R (restrictin, janusin). (1433 aa)
	LOC113014881	Chondroitin sulfate proteoglycan 5b. (663 aa)
	LOC113024981	Laminin, beta 1a. (1793 aa)
	ENSACLP00000024384	Achaete-scute family bHLH transcription factor 1a. (173 aa)
	LOC113028842	Neurogenin 1. (194 aa)
	ENSACLP00000018137	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (261 aa)
	LOC113011397	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC113036033	Growth associated protein 43. (242 aa)
	LOC113029262	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	LOC113029297	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	LOC113029296	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC113029295	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC113029294	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	ENSACLP00000011080	Laminin, beta 2 (laminin S). (1439 aa)
	LOC113033543	Tenascin C. (1817 aa)
	cspg5	Chondroitin sulfate proteoglycan 5a. (530 aa)
	LOC113026110	JunE proto-oncogene, AP-1 transcription factor subunit. (347 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000024384	LOC113028842	ENSACLP00000024384	ENSACLP00000023331	Achaete-scute family bHLH transcription factor 1a.	Neurogenin 1.	0.584
ENSACLP00000039531	LOC113025456	ENSACLP00000039531	ENSACLP00000039450	Fibronectin type-III domain-containing protein.	Zmp:0000000846.	0.736
ENSACLP00000039531	LOC113033543	ENSACLP00000039531	ENSACLP00000010242	Fibronectin type-III domain-containing protein.	Tenascin C.	0.736
ENSACLP00000039531	tnr	ENSACLP00000039531	ENSACLP00000039442	Fibronectin type-III domain-containing protein.	Tenascin R (restrictin, janusin).	0.811
LOC113025456	ENSACLP00000039531	ENSACLP00000039450	ENSACLP00000039531	Zmp:0000000846.	Fibronectin type-III domain-containing protein.	0.736
LOC113025456	LOC113033543	ENSACLP00000039450	ENSACLP00000010242	Zmp:0000000846.	Tenascin C.	0.740
LOC113025456	tnr	ENSACLP00000039450	ENSACLP00000039442	Zmp:0000000846.	Tenascin R (restrictin, janusin).	0.811
LOC113028842	ENSACLP00000024384	ENSACLP00000023331	ENSACLP00000024384	Neurogenin 1.	Achaete-scute family bHLH transcription factor 1a.	0.584
LOC113033543	ENSACLP00000039531	ENSACLP00000010242	ENSACLP00000039531	Tenascin C.	Fibronectin type-III domain-containing protein.	0.736
LOC113033543	LOC113025456	ENSACLP00000010242	ENSACLP00000039450	Tenascin C.	Zmp:0000000846.	0.740
LOC113033543	tnr	ENSACLP00000010242	ENSACLP00000039442	Tenascin C.	Tenascin R (restrictin, janusin).	0.845
tnr	ENSACLP00000039531	ENSACLP00000039442	ENSACLP00000039531	Tenascin R (restrictin, janusin).	Fibronectin type-III domain-containing protein.	0.811
tnr	LOC113025456	ENSACLP00000039442	ENSACLP00000039450	Tenascin R (restrictin, janusin).	Zmp:0000000846.	0.811
tnr	LOC113033543	ENSACLP00000039442	ENSACLP00000010242	Tenascin R (restrictin, janusin).	Tenascin C.	0.845