(20 nodes) Monoubiquitinated histone H2A deubiquitination network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000022669	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (677 aa)
	ENSACLP00000022791	Uncharacterized protein. (79 aa)
	ENSACLP00000021146	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (641 aa)
	TADA1	Transcriptional adaptor 1. (336 aa)
	mysm1	Myb-like, SWIRM and MPN domains 1. (858 aa)
	LOC113013056	Ataxin 7-like 2b. (591 aa)
	ATXN7L1	Ataxin 7 like 1. (791 aa)
	atxn7l2	Ataxin 7-like 2a. (751 aa)
	ENSACLP00000022849	Uncharacterized protein. (578 aa)
	ENSACLP00000023083	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (2569 aa)
	ENSACLP00000041154	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (162 aa)
	supt3h	SPT3 homolog, SAGA and STAGA complex component. (349 aa)
	supt7l	SPT7 like, STAGA complex gamma subunit. (431 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
	sf3b5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	bap1	Ubiquitin carboxyl-terminal hydrolase. (743 aa)
	taf5	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
	sgf29	SAGA complex associated factor 29. (290 aa)
	ENSACLP00000023991	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (622 aa)
	ENSACLP00000022797	Ataxin 7. (589 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATXN7L1	ENSACLP00000021146	ENSACLP00000000791	ENSACLP00000021146	Ataxin 7 like 1.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.924
ATXN7L1	ENSACLP00000022669	ENSACLP00000000791	ENSACLP00000022669	Ataxin 7 like 1.	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.894
ATXN7L1	ENSACLP00000022849	ENSACLP00000000791	ENSACLP00000022849	Ataxin 7 like 1.	Uncharacterized protein.	0.907
ATXN7L1	ENSACLP00000023083	ENSACLP00000000791	ENSACLP00000023083	Ataxin 7 like 1.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.907
ATXN7L1	ENSACLP00000023991	ENSACLP00000000791	ENSACLP00000023991	Ataxin 7 like 1.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.855
ATXN7L1	ENSACLP00000041154	ENSACLP00000000791	ENSACLP00000041154	Ataxin 7 like 1.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.944
ATXN7L1	TADA1	ENSACLP00000000791	ENSACLP00000020491	Ataxin 7 like 1.	Transcriptional adaptor 1.	0.724
ATXN7L1	sf3b5	ENSACLP00000000791	ENSACLP00000033051	Ataxin 7 like 1.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.662
ATXN7L1	sgf29	ENSACLP00000000791	ENSACLP00000024605	Ataxin 7 like 1.	SAGA complex associated factor 29.	0.908
ATXN7L1	supt3h	ENSACLP00000000791	ENSACLP00000040278	Ataxin 7 like 1.	SPT3 homolog, SAGA and STAGA complex component.	0.933
ATXN7L1	supt7l	ENSACLP00000000791	ENSACLP00000038232	Ataxin 7 like 1.	SPT7 like, STAGA complex gamma subunit.	0.805
ATXN7L1	taf10	ENSACLP00000000791	ENSACLP00000033377	Ataxin 7 like 1.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.957
ATXN7L1	taf5	ENSACLP00000000791	ENSACLP00000027148	Ataxin 7 like 1.	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.855
ENSACLP00000021146	ATXN7L1	ENSACLP00000021146	ENSACLP00000000791	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Ataxin 7 like 1.	0.924
ENSACLP00000021146	ENSACLP00000022669	ENSACLP00000021146	ENSACLP00000022669	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.904
ENSACLP00000021146	ENSACLP00000022791	ENSACLP00000021146	ENSACLP00000022791	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.924
ENSACLP00000021146	ENSACLP00000022797	ENSACLP00000021146	ENSACLP00000022797	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Ataxin 7.	0.924
ENSACLP00000021146	ENSACLP00000022849	ENSACLP00000021146	ENSACLP00000022849	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.967
ENSACLP00000021146	ENSACLP00000023083	ENSACLP00000021146	ENSACLP00000023083	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.967
ENSACLP00000021146	ENSACLP00000023991	ENSACLP00000021146	ENSACLP00000023991	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.989