STRINGSTRING
ppib ppib phb phb ENSACLP00000003429 ENSACLP00000003429 EIF2AK4 EIF2AK4 LOC113014938 LOC113014938 prkn prkn LOC113014360 LOC113014360 YTHDC2 YTHDC2 tbc1d20 tbc1d20 LOC113032406 LOC113032406
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
phbProhibitin. (271 aa)
ENSACLP00000003429RWD domain-containing protein. (141 aa)
EIF2AK4Eukaryotic translation initiation factor 2 alpha kinase 4. (1503 aa)
LOC113014938Si:dkey-206d17.12. (644 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (456 aa)
LOC113014360Zgc:63863. (432 aa)
YTHDC2YTH domain containing 2. (1364 aa)
tbc1d20TBC1 domain family, member 20. (397 aa)
LOC113032406Zinc finger CCCH-type containing 12A. (632 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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