STRINGSTRING
mif4gd mif4gd cdk5rap1 cdk5rap1 LOC113010129 LOC113010129 rcc1l rcc1l LOC113029668 LOC113029668 dhx9 dhx9 LOC113022391 LOC113022391 guf1 guf1 fmr1 fmr1 rps9 rps9 pink1 pink1 LOC113016105 LOC113016105 eif2b5 eif2b5 LOC113035495 LOC113035495 larp6 larp6 LOC113036861 LOC113036861 LOC113028158 LOC113028158 ythdf3 ythdf3 LOC113030367 LOC113030367 ENSACLP00000038250 ENSACLP00000038250 LOC113017433 LOC113017433 c1qbp c1qbp YTHDF1 YTHDF1 usp16 usp16 dazl dazl ENSACLP00000001108 ENSACLP00000001108 ENSACLP00000001138 ENSACLP00000001138 ngrn ngrn upf3b upf3b dhx29 dhx29 ENSACLP00000002980 ENSACLP00000002980 cirbp cirbp LOC113029159 LOC113029159 nck2 nck2 ENSACLP00000003429 ENSACLP00000003429 EIF2AK4 EIF2AK4 LOC113016001 LOC113016001 LOC113013454 LOC113013454 ENSACLP00000004294 ENSACLP00000004294 LOC113036051 LOC113036051 rmnd1 rmnd1 EIF5AL1 EIF5AL1 zcchc4 zcchc4 ENSACLP00000008485 ENSACLP00000008485 ctif ctif ENSACLP00000010041 ENSACLP00000010041 ENSACLP00000010119 ENSACLP00000010119 LOC113012426 LOC113012426 nat10 nat10 ENSACLP00000011208 ENSACLP00000011208 LOC113023567 LOC113023567 LOC113012021 LOC113012021 paip1 paip1 LOC113018795 LOC113018795 mettl3 mettl3 polr2d polr2d ENSACLP00000035850 ENSACLP00000035850 nckap5 nckap5 LOC113031642 LOC113031642 LOC113016914 LOC113016914 trub2 trub2 mettl5 mettl5 ENSACLP00000016906 ENSACLP00000016906 LOC113011571 LOC113011571 ENSACLP00000018362 ENSACLP00000018362 ENSACLP00000019596 ENSACLP00000019596 LOC113029836 LOC113029836 mrps27 mrps27 LOC113033689 LOC113033689 dhx36 dhx36 cnbp cnbp ENSACLP00000021240 ENSACLP00000021240 pcif1 pcif1 impact impact EIF4G1 EIF4G1 polr2g polr2g eif2s3 eif2s3 larp1 larp1 ENSACLP00000022632 ENSACLP00000022632 ENSACLP00000024611 ENSACLP00000024611 LOC113032634 LOC113032634 jmjd4 jmjd4 tent4b tent4b ENSACLP00000035207 ENSACLP00000035207 ENSACLP00000038995 ENSACLP00000038995 LARP4B LARP4B uhmk1 uhmk1 nck1 nck1 LIN28A LIN28A fastkd2 fastkd2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mif4gdMIF4G domain containing. (221 aa)
cdk5rap1CDK5 regulatory subunit associated protein 1. (598 aa)
LOC113010129Uncharacterized protein. (1716 aa)
rcc1lRCC1 like. (451 aa)
LOC113029668Eukaryotic translation initiation factor 5A. (156 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1271 aa)
LOC113022391Ubiquinol-cytochrome c reductase complex assembly factor 2. (129 aa)
guf1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (675 aa)
fmr1Fragile X mental retardation 1. (600 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
pink1PTEN induced kinase 1. (574 aa)
LOC113016105ELAV-like protein; Belongs to the RRM elav family. (370 aa)
eif2b5Eukaryotic translation initiation factor 2B, subunit 5 epsilon. (708 aa)
LOC113035495Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (543 aa)
larp6La ribonucleoprotein domain family, member 6a. (709 aa)
LOC113036861Forkhead box A3. (466 aa)
LOC113028158Cytochrome C oxidase assembly factor 3a. (100 aa)
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (605 aa)
LOC113030367Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (539 aa)
ENSACLP00000038250Fragile X mental retardation, autosomal homolog 1. (708 aa)
LOC113017433MIF4G domain-containing protein. (202 aa)
c1qbpComplement component 1, q subcomponent binding protein. (288 aa)
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (616 aa)
usp16Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B. (841 aa)
dazlDeleted in azoospermia-like. (217 aa)
ENSACLP00000001108La ribonucleoprotein domain family, member 4Ab. (358 aa)
ENSACLP00000001138Uncharacterized protein. (274 aa)
ngrnNeugrin, neurite outgrowth associated. (307 aa)
upf3bUPF3B regulator of nonsense mediated mRNA decay. (459 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
ENSACLP00000002980Eukaryotic translation initiation factor 4 gamma, 3a. (1453 aa)
cirbpCold inducible RNA binding protein b. (180 aa)
LOC113029159FAST kinase domains 3. (659 aa)
nck2Cytoplasmic protein. (398 aa)
ENSACLP00000003429RWD domain-containing protein. (141 aa)
EIF2AK4Eukaryotic translation initiation factor 2 alpha kinase 4. (1503 aa)
LOC113016001RRM domain-containing protein. (334 aa)
LOC113013454La ribonucleoprotein domain family, member 4Aa. (809 aa)
ENSACLP00000004294Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (524 aa)
LOC113036051Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (503 aa)
rmnd1Required for meiotic nuclear division 1 homolog. (415 aa)
EIF5AL1Eukaryotic translation initiation factor 5A. (155 aa)
zcchc4Zinc finger, CCHC domain containing 4. (496 aa)
ENSACLP00000008485SERPINE1 mRNA binding protein 1a. (375 aa)
ctifCBP80/20-dependent translation initiation factor. (696 aa)
ENSACLP00000010041Cytochrome C oxidase assembly factor 3b. (125 aa)
ENSACLP00000010119CCHC-type zinc finger, nucleic acid binding protein a. (160 aa)
LOC113012426Eukaryotic translation initiation factor 5A. (153 aa)
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1035 aa)
ENSACLP00000011208DnaJ (Hsp40) homolog, subfamily C, member 3a. (408 aa)
LOC113023567Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (470 aa)
LOC113012021ELAV-like protein; Belongs to the RRM elav family. (343 aa)
paip1Poly(A) binding protein interacting protein 1. (448 aa)
LOC113018795DnaJ (Hsp40) homolog, subfamily C, member 3b. (498 aa)
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (594 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (212 aa)
ENSACLP00000035850tRNA methyltransferase 10C, mitochondrial RNase P subunit. (417 aa)
nckap5NCK associated protein 5. (2032 aa)
LOC113031642Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
LOC113016914Fragile X mental retardation, autosomal homolog 2. (672 aa)
trub2TruB pseudouridine (psi) synthase family member 2. (330 aa)
mettl5Methyltransferase like 5. (220 aa)
ENSACLP00000016906Uncharacterized protein; Belongs to the complex I LYR family. (70 aa)
LOC113011571La ribonucleoprotein domain family, member 1B. (1084 aa)
ENSACLP00000018362Serine/threonine-protein kinase TOR. (2384 aa)
ENSACLP00000019596Proline rich 16. (215 aa)
LOC113029836HTH La-type RNA-binding domain-containing protein. (500 aa)
mrps27Mitochondrial ribosomal protein S27. (420 aa)
LOC113033689Hyaluronan binding protein 4. (357 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1064 aa)
cnbpCCHC-type zinc finger, nucleic acid binding protein b. (161 aa)
ENSACLP00000021240Terminal nucleotidyltransferase 4A. (525 aa)
pcif1PDX1 C-terminal inhibiting factor 1. (734 aa)
impactImpact RWD domain protein. (340 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1717 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (181 aa)
eif2s3Eukaryotic translation initiation factor 2, subunit 3 gamma. (493 aa)
larp1La ribonucleoprotein domain family, member 1. (1114 aa)
ENSACLP00000022632ATP-binding cassette, sub-family F (GCN20), member 1. (748 aa)
ENSACLP00000024611Polymerase (DNA-directed), delta interacting protein 3. (559 aa)
LOC113032634Uncharacterized protein. (821 aa)
jmjd4Jumonji domain containing 4. (431 aa)
tent4bTerminal nucleotidyltransferase 4B. (669 aa)
ENSACLP00000035207MTTase N-terminal domain-containing protein. (177 aa)
ENSACLP00000038995UPF3A regulator of nonsense mediated mRNA decay. (481 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (770 aa)
uhmk1U2AF homology motif (UHM) kinase 1. (440 aa)
nck1Cytoplasmic protein. (392 aa)
LIN28ALin-28 homolog A. (202 aa)
fastkd2FAST kinase domains 2. (667 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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