(17 nodes) Positive regulation of transcription by RNA polymerase I network (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wdr75	WD repeat domain 75. (837 aa)
	nol11	Nucleolar protein 11. (720 aa)
	ENSACLP00000014943	UTP15 small subunit processome component. (571 aa)
	LOC113019369	Uncharacterized protein. (481 aa)
	ENSACLP00000018362	Serine/threonine-protein kinase TOR. (2384 aa)
	eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3. (1100 aa)
	lyar	Ly1 antibody reactive homolog (mouse). (344 aa)
	ENSACLP00000024289	Upstream binding transcription factor, like. (701 aa)
	ENSACLP00000025811	U3snoRNP10 domain-containing protein. (341 aa)
	ENSACLP00000025841	BP28CT domain-containing protein. (335 aa)
	mars1	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (928 aa)
	rasl11a	RAS-like, family 11, member A. (255 aa)
	LOC113026382	Protein phosphatase 1, regulatory subunit 15B. (565 aa)
	ENSACLP00000037852	Upstream binding transcription factor. (672 aa)
	dhx33	DEAH (Asp-Glu-Ala-His) box polypeptide 33. (703 aa)
	wdr43	WD repeat domain 43. (650 aa)
	pwp1	PWP1 homolog, endonuclein. (487 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000014943	ENSACLP00000025811	ENSACLP00000014943	ENSACLP00000025811	UTP15 small subunit processome component.	U3snoRNP10 domain-containing protein.	0.996
ENSACLP00000014943	ENSACLP00000025841	ENSACLP00000014943	ENSACLP00000025841	UTP15 small subunit processome component.	BP28CT domain-containing protein.	0.996
ENSACLP00000014943	dhx33	ENSACLP00000014943	ENSACLP00000037903	UTP15 small subunit processome component.	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	0.849
ENSACLP00000014943	nol11	ENSACLP00000014943	ENSACLP00000003558	UTP15 small subunit processome component.	Nucleolar protein 11.	0.984
ENSACLP00000014943	pwp1	ENSACLP00000014943	ENSACLP00000039869	UTP15 small subunit processome component.	PWP1 homolog, endonuclein.	0.860
ENSACLP00000014943	wdr43	ENSACLP00000014943	ENSACLP00000037986	UTP15 small subunit processome component.	WD repeat domain 43.	0.999
ENSACLP00000014943	wdr75	ENSACLP00000014943	ENSACLP00000002977	UTP15 small subunit processome component.	WD repeat domain 75.	0.999
ENSACLP00000018362	rasl11a	ENSACLP00000018362	ENSACLP00000028469	Serine/threonine-protein kinase TOR.	RAS-like, family 11, member A.	0.610
ENSACLP00000025811	ENSACLP00000014943	ENSACLP00000025811	ENSACLP00000014943	U3snoRNP10 domain-containing protein.	UTP15 small subunit processome component.	0.996
ENSACLP00000025811	ENSACLP00000025841	ENSACLP00000025811	ENSACLP00000025841	U3snoRNP10 domain-containing protein.	BP28CT domain-containing protein.	0.900
ENSACLP00000025811	dhx33	ENSACLP00000025811	ENSACLP00000037903	U3snoRNP10 domain-containing protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	0.785
ENSACLP00000025811	nol11	ENSACLP00000025811	ENSACLP00000003558	U3snoRNP10 domain-containing protein.	Nucleolar protein 11.	0.947
ENSACLP00000025811	pwp1	ENSACLP00000025811	ENSACLP00000039869	U3snoRNP10 domain-containing protein.	PWP1 homolog, endonuclein.	0.709
ENSACLP00000025811	wdr43	ENSACLP00000025811	ENSACLP00000037986	U3snoRNP10 domain-containing protein.	WD repeat domain 43.	0.994
ENSACLP00000025811	wdr75	ENSACLP00000025811	ENSACLP00000002977	U3snoRNP10 domain-containing protein.	WD repeat domain 75.	0.997
ENSACLP00000025841	ENSACLP00000014943	ENSACLP00000025841	ENSACLP00000014943	BP28CT domain-containing protein.	UTP15 small subunit processome component.	0.996
ENSACLP00000025841	ENSACLP00000025811	ENSACLP00000025841	ENSACLP00000025811	BP28CT domain-containing protein.	U3snoRNP10 domain-containing protein.	0.900
ENSACLP00000025841	dhx33	ENSACLP00000025841	ENSACLP00000037903	BP28CT domain-containing protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 33.	0.785
ENSACLP00000025841	nol11	ENSACLP00000025841	ENSACLP00000003558	BP28CT domain-containing protein.	Nucleolar protein 11.	0.947
ENSACLP00000025841	pwp1	ENSACLP00000025841	ENSACLP00000039869	BP28CT domain-containing protein.	PWP1 homolog, endonuclein.	0.709