49 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113035957	Phosphatidylinositol binding clathrin assembly protein b. (736 aa)
	LOC113022039	Uncharacterized protein. (430 aa)
	ston1	Stonin-1; May be involved in the endocytic machinery. (722 aa)
	ENSACLP00000000836	Intersectin 1 (SH3 domain protein). (1153 aa)
	ENSACLP00000001080	Uncharacterized protein. (499 aa)
	nlgn1	Neuroligin 1. (882 aa)
	LOC113028240	Gamma-synuclein; Belongs to the synuclein family. (119 aa)
	ENSACLP00000003287	Synaptojanin 1. (1665 aa)
	sncb	Beta-synuclein; Belongs to the synuclein family. (117 aa)
	sncg	Gamma-synuclein; Belongs to the synuclein family. (124 aa)
	LOC113010947	SH3-domain GRB2-like 1a. (369 aa)
	nlgn3	Neuroligin 3a. (857 aa)
	ENSACLP00000008934	Synaptotagmin Vb. (387 aa)
	LOC113025649	Uncharacterized protein; Belongs to the synuclein family. (127 aa)
	ENSACLP00000011679	Synaptosome associated protein 91b. (298 aa)
	LOC113030255	Neuroligin 2b. (874 aa)
	ENSACLP00000012620	Neuroligin 4 X-linked a. (879 aa)
	ENSACLP00000012866	Uncharacterized protein. (521 aa)
	ENSACLP00000012873	SH3 domain-containing protein. (69 aa)
	ENSACLP00000012953	EH domain-containing protein. (106 aa)
	DNM1	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (848 aa)
	LOC113030110	ENTH domain-containing protein. (563 aa)
	ENSACLP00000014175	Intersectin 2b. (1549 aa)
	dnm1	Dynamin 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (861 aa)
	ENSACLP00000017269	Nitric oxide synthase trafficking. (526 aa)
	ENSACLP00000017404	COesterase domain-containing protein. (309 aa)
	LOC113030783	Neuroligin 3b. (817 aa)
	ENSACLP00000019431	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (289 aa)
	DNM3	Dynamin 3. (380 aa)
	LOC113010405	Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (844 aa)
	LOC113017186	Uncharacterized protein. (351 aa)
	ENSACLP00000025045	COesterase domain-containing protein. (295 aa)
	syt1	Synaptotagmin Ia. (419 aa)
	LOC113007950	COesterase domain-containing protein. (872 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	nlgn2	Neuroligin 2a. (815 aa)
	ENSACLP00000028834	DENN/MADD domain containing 1A. (427 aa)
	sh3gl1	SH3-domain GRB2-like 1b. (351 aa)
	ENSACLP00000032693	Si:ch211-233a24.2. (4965 aa)
	LOC113020607	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (878 aa)
	LOC113026845	Synaptotagmin Ib. (408 aa)
	LOC113019101	Si:ch211-200p22.4. (724 aa)
	SH3GL2	SH3 domain containing GRB2 like 2a, endophilin A1. (322 aa)
	LOC113023863	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (852 aa)
	ENSACLP00000036176	ENTH domain-containing protein. (240 aa)
	LOC113030574	ENTH domain-containing protein. (616 aa)
	ENSACLP00000038375	SH3-domain GRB2-like 3a. (425 aa)
	kiaa1107	Si:ch73-389b16.2. (1579 aa)
	fcho2	FCH domain only 2. (1088 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNM1	ENSACLP00000000836	ENSACLP00000013647	ENSACLP00000000836	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Intersectin 1 (SH3 domain protein).	0.753
DNM1	ENSACLP00000001080	ENSACLP00000013647	ENSACLP00000001080	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.753
DNM1	ENSACLP00000003287	ENSACLP00000013647	ENSACLP00000003287	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Synaptojanin 1.	0.413
DNM1	ENSACLP00000012866	ENSACLP00000013647	ENSACLP00000012866	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.814
DNM1	ENSACLP00000012873	ENSACLP00000013647	ENSACLP00000012873	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	SH3 domain-containing protein.	0.814
DNM1	ENSACLP00000012953	ENSACLP00000013647	ENSACLP00000012953	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	EH domain-containing protein.	0.745
DNM1	ENSACLP00000014175	ENSACLP00000013647	ENSACLP00000014175	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Intersectin 2b.	0.814
DNM1	ENSACLP00000017269	ENSACLP00000013647	ENSACLP00000017269	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Nitric oxide synthase trafficking.	0.487
DNM1	ENSACLP00000038375	ENSACLP00000013647	ENSACLP00000038375	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	SH3-domain GRB2-like 3a.	0.714
DNM1	LOC113010947	ENSACLP00000013647	ENSACLP00000004774	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	SH3-domain GRB2-like 1a.	0.708
DNM1	LOC113017186	ENSACLP00000013647	ENSACLP00000022965	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.714
DNM1	LOC113020607	ENSACLP00000013647	ENSACLP00000032876	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.697
DNM1	LOC113023863	ENSACLP00000013647	ENSACLP00000035731	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.545
DNM1	SH3GL2	ENSACLP00000013647	ENSACLP00000033353	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	SH3 domain containing GRB2 like 2a, endophilin A1.	0.714
DNM1	sh3gl1	ENSACLP00000013647	ENSACLP00000032474	Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	SH3-domain GRB2-like 1b.	0.714
DNM3	ENSACLP00000000836	ENSACLP00000019496	ENSACLP00000000836	Dynamin 3.	Intersectin 1 (SH3 domain protein).	0.745
DNM3	ENSACLP00000001080	ENSACLP00000019496	ENSACLP00000001080	Dynamin 3.	Uncharacterized protein.	0.745
DNM3	ENSACLP00000003287	ENSACLP00000019496	ENSACLP00000003287	Dynamin 3.	Synaptojanin 1.	0.413
DNM3	ENSACLP00000012866	ENSACLP00000019496	ENSACLP00000012866	Dynamin 3.	Uncharacterized protein.	0.814
DNM3	ENSACLP00000012873	ENSACLP00000019496	ENSACLP00000012873	Dynamin 3.	SH3 domain-containing protein.	0.814