26 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	nkx2-5	NK2 homeobox 5. (320 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (940 aa)
	ENSACLP00000005301	TAF4 domain-containing protein. (365 aa)
	LOC113023510	MADS-box domain-containing protein. (517 aa)
	LOC113026110	JunE proto-oncogene, AP-1 transcription factor subunit. (347 aa)
	ENSACLP00000009063	PAX interacting (with transcription-activation domain) protein 1. (1100 aa)
	ercc6	Excision repair cross-complementation group 6. (1439 aa)
	taf13	TATA-box binding protein associated factor 13. (201 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1812 aa)
	ENSACLP00000018137	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (261 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1064 aa)
	ENSACLP00000021146	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (641 aa)
	ENSACLP00000024802	SUB1 regulator of transcription a. (196 aa)
	ENSACLP00000041154	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (162 aa)
	ercc1	Excision repair cross-complementation group 1. (352 aa)
	LOC113025881	TAFH domain-containing protein. (1101 aa)
	fosl1	FOS-like antigen 1a. (344 aa)
	ENSACLP00000029056	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (701 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	ENSACLP00000031500	Si:dkey-23i12.7. (163 aa)
	LOC113024996	Si:dkey-219c3.2. (944 aa)
	med14	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
	SRF	Serum response factor. (597 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
	gtf2a1	General transcription factor IIA, 1. (385 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005301	ENSACLP00000021146	ENSACLP00000005301	ENSACLP00000021146	TAF4 domain-containing protein.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.976
ENSACLP00000005301	ENSACLP00000029056	ENSACLP00000005301	ENSACLP00000029056	TAF4 domain-containing protein.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.901
ENSACLP00000005301	ENSACLP00000031500	ENSACLP00000005301	ENSACLP00000031500	TAF4 domain-containing protein.	Si:dkey-23i12.7.	0.546
ENSACLP00000005301	ENSACLP00000041154	ENSACLP00000005301	ENSACLP00000041154	TAF4 domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.976
ENSACLP00000005301	LOC113024996	ENSACLP00000005301	ENSACLP00000031851	TAF4 domain-containing protein.	Si:dkey-219c3.2.	0.889
ENSACLP00000005301	LOC113025881	ENSACLP00000005301	ENSACLP00000026797	TAF4 domain-containing protein.	TAFH domain-containing protein.	0.887
ENSACLP00000005301	fosl1	ENSACLP00000005301	ENSACLP00000027230	TAF4 domain-containing protein.	FOS-like antigen 1a.	0.546
ENSACLP00000005301	gtf2a1	ENSACLP00000005301	ENSACLP00000035222	TAF4 domain-containing protein.	General transcription factor IIA, 1.	0.886
ENSACLP00000005301	gtf2a2	ENSACLP00000005301	ENSACLP00000037151	TAF4 domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.923
ENSACLP00000005301	med1	ENSACLP00000005301	ENSACLP00000011677	TAF4 domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.542
ENSACLP00000005301	med14	ENSACLP00000005301	ENSACLP00000038550	TAF4 domain-containing protein.	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.560
ENSACLP00000005301	taf10	ENSACLP00000005301	ENSACLP00000033377	TAF4 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.964
ENSACLP00000005301	taf13	ENSACLP00000005301	ENSACLP00000010915	TAF4 domain-containing protein.	TATA-box binding protein associated factor 13.	0.962
ENSACLP00000005301	taf3	ENSACLP00000005301	ENSACLP00000004565	TAF4 domain-containing protein.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.952
ENSACLP00000009063	ercc1	ENSACLP00000009063	ENSACLP00000025684	PAX interacting (with transcription-activation domain) protein 1.	Excision repair cross-complementation group 1.	0.449
ENSACLP00000018137	ENSACLP00000031500	ENSACLP00000018137	ENSACLP00000031500	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	Si:dkey-23i12.7.	0.955
ENSACLP00000018137	ENSACLP00000041154	ENSACLP00000018137	ENSACLP00000041154	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.643
ENSACLP00000018137	fosl1	ENSACLP00000018137	ENSACLP00000027230	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	FOS-like antigen 1a.	0.955
ENSACLP00000021146	ENSACLP00000005301	ENSACLP00000021146	ENSACLP00000005301	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4 domain-containing protein.	0.976
ENSACLP00000021146	ENSACLP00000029056	ENSACLP00000021146	ENSACLP00000029056	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.976