STRINGSTRING
ENSACLP00000018204 ENSACLP00000018204 fgf4 fgf4 atxn1l atxn1l sirt6 sirt6 LOC113009440 LOC113009440 pdcd2 pdcd2 ENSACLP00000020797 ENSACLP00000020797 kdm1a kdm1a vegfc vegfc LOC113036502 LOC113036502
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSACLP00000018204Protein tyrosine phosphatase receptor type C. (1328 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (193 aa)
atxn1lAtaxin 1-like. (841 aa)
sirt6Sirtuin 6. (351 aa)
LOC113009440Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (190 aa)
pdcd2Programmed cell death 2. (365 aa)
ENSACLP00000020797Uncharacterized protein. (83 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (852 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (415 aa)
LOC113036502Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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