17 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113010089	Vav 3 guanine nucleotide exchange factor b. (461 aa)
	ENSACLP00000021254	Laminin EGF-like domain-containing protein. (1119 aa)
	ntng1	Netrin g1a. (542 aa)
	LOC113009021	Laminin, beta 1b. (1779 aa)
	ENSACLP00000032989	Uncharacterized protein. (536 aa)
	ntn4	Netrin 4. (626 aa)
	c14h11orf53	Si:ch211-213d14.1. (348 aa)
	LAMA2	Laminin subunit alpha 2. (2940 aa)
	LOC113022838	Si:dkey-202e22.2. (657 aa)
	lama4	Laminin, alpha 4. (1873 aa)
	LOC113024981	Laminin, beta 1a. (1793 aa)
	ENSACLP00000032909	Si:ch211-241e1.3. (1105 aa)
	lamb3	Uncharacterized protein. (1158 aa)
	ENSACLP00000005167	Uncharacterized protein. (600 aa)
	ENSACLP00000007207	Uncharacterized protein. (157 aa)
	ENSACLP00000011080	Laminin, beta 2 (laminin S). (1439 aa)
	ENSACLP00000012857	Laminin, alpha 5. (3093 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005167	ENSACLP00000012857	ENSACLP00000005167	ENSACLP00000012857	Uncharacterized protein.	Laminin, alpha 5.	0.441
ENSACLP00000005167	ENSACLP00000021254	ENSACLP00000005167	ENSACLP00000021254	Uncharacterized protein.	Laminin EGF-like domain-containing protein.	0.441
ENSACLP00000005167	ENSACLP00000032909	ENSACLP00000005167	ENSACLP00000032909	Uncharacterized protein.	Si:ch211-241e1.3.	0.441
ENSACLP00000005167	ENSACLP00000032989	ENSACLP00000005167	ENSACLP00000032989	Uncharacterized protein.	Uncharacterized protein.	0.441
ENSACLP00000005167	LAMA2	ENSACLP00000005167	ENSACLP00000038755	Uncharacterized protein.	Laminin subunit alpha 2.	0.470
ENSACLP00000005167	LOC113010089	ENSACLP00000005167	ENSACLP00000013575	Uncharacterized protein.	Vav 3 guanine nucleotide exchange factor b.	0.462
ENSACLP00000005167	lama4	ENSACLP00000005167	ENSACLP00000028180	Uncharacterized protein.	Laminin, alpha 4.	0.441
ENSACLP00000005167	ntng1	ENSACLP00000005167	ENSACLP00000021583	Uncharacterized protein.	Netrin g1a.	0.462
ENSACLP00000011080	ENSACLP00000012857	ENSACLP00000011080	ENSACLP00000012857	Laminin, beta 2 (laminin S).	Laminin, alpha 5.	0.779
ENSACLP00000011080	ENSACLP00000021254	ENSACLP00000011080	ENSACLP00000021254	Laminin, beta 2 (laminin S).	Laminin EGF-like domain-containing protein.	0.779
ENSACLP00000011080	ENSACLP00000032909	ENSACLP00000011080	ENSACLP00000032909	Laminin, beta 2 (laminin S).	Si:ch211-241e1.3.	0.779
ENSACLP00000011080	ENSACLP00000032989	ENSACLP00000011080	ENSACLP00000032989	Laminin, beta 2 (laminin S).	Uncharacterized protein.	0.779
ENSACLP00000011080	LAMA2	ENSACLP00000011080	ENSACLP00000038755	Laminin, beta 2 (laminin S).	Laminin subunit alpha 2.	0.946
ENSACLP00000011080	LOC113010089	ENSACLP00000011080	ENSACLP00000013575	Laminin, beta 2 (laminin S).	Vav 3 guanine nucleotide exchange factor b.	0.462
ENSACLP00000011080	lama4	ENSACLP00000011080	ENSACLP00000028180	Laminin, beta 2 (laminin S).	Laminin, alpha 4.	0.779
ENSACLP00000011080	ntng1	ENSACLP00000011080	ENSACLP00000021583	Laminin, beta 2 (laminin S).	Netrin g1a.	0.462
ENSACLP00000012857	ENSACLP00000005167	ENSACLP00000012857	ENSACLP00000005167	Laminin, alpha 5.	Uncharacterized protein.	0.441
ENSACLP00000012857	ENSACLP00000011080	ENSACLP00000012857	ENSACLP00000011080	Laminin, alpha 5.	Laminin, beta 2 (laminin S).	0.779
ENSACLP00000012857	LAMA2	ENSACLP00000012857	ENSACLP00000038755	Laminin, alpha 5.	Laminin subunit alpha 2.	0.574
ENSACLP00000012857	LOC113009021	ENSACLP00000012857	ENSACLP00000022747	Laminin, alpha 5.	Laminin, beta 1b.	0.744