(21 nodes) Zinc finger, ZZ-type network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000000886	Dystrophin related protein 2. (909 aa)
	kcmf1	Potassium channel modulatory factor 1. (389 aa)
	dytn	ZZ-type domain-containing protein. (621 aa)
	LOC113017711	Uncharacterized protein. (116 aa)
	tada2a	Transcriptional adapter. (445 aa)
	ENSACLP00000009411	Dystrophin. (1187 aa)
	ENSACLP00000009419	Zinc finger, ZZ-type containing 3. (1142 aa)
	LOC113011687	Dystrobrevin. (623 aa)
	ENSACLP00000012872	Uncharacterized protein. (490 aa)
	tada2b	Transcriptional adapter. (493 aa)
	LOC113021131	E1A binding protein p300 b. (2771 aa)
	ENSACLP00000023258	Mindbomb E3 ubiquitin protein ligase 1. (1034 aa)
	mib2	Mindbomb E3 ubiquitin protein ligase 2. (1071 aa)
	sqstm1	Sequestosome 1. (428 aa)
	LOC113027597	E1A binding protein p300 a. (2787 aa)
	dtna	Dystrobrevin. (744 aa)
	ENSACLP00000035689	HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4818 aa)
	ENSACLP00000040635	Dystrobrevin. (579 aa)
	zzef1	Zinc finger, ZZ-type with EF hand domain 1. (3084 aa)
	LOC113020749	CREB binding protein b. (2474 aa)
	ENSACLP00000036881	CREB binding protein a. (2436 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000000886	ENSACLP00000040635	ENSACLP00000000886	ENSACLP00000040635	Dystrophin related protein 2.	Dystrobrevin.	0.644
ENSACLP00000000886	LOC113011687	ENSACLP00000000886	ENSACLP00000012230	Dystrophin related protein 2.	Dystrobrevin.	0.644
ENSACLP00000000886	dtna	ENSACLP00000000886	ENSACLP00000027933	Dystrophin related protein 2.	Dystrobrevin.	0.644
ENSACLP00000009411	ENSACLP00000040635	ENSACLP00000009411	ENSACLP00000040635	Dystrophin.	Dystrobrevin.	0.644
ENSACLP00000009411	LOC113011687	ENSACLP00000009411	ENSACLP00000012230	Dystrophin.	Dystrobrevin.	0.644
ENSACLP00000009411	dtna	ENSACLP00000009411	ENSACLP00000027933	Dystrophin.	Dystrobrevin.	0.654
ENSACLP00000009419	LOC113017711	ENSACLP00000009419	ENSACLP00000007255	Zinc finger, ZZ-type containing 3.	Uncharacterized protein.	0.929
ENSACLP00000009419	tada2a	ENSACLP00000009419	ENSACLP00000007720	Zinc finger, ZZ-type containing 3.	Transcriptional adapter.	0.929
ENSACLP00000009419	tada2b	ENSACLP00000009419	ENSACLP00000018382	Zinc finger, ZZ-type containing 3.	Transcriptional adapter.	0.688
ENSACLP00000023258	mib2	ENSACLP00000023258	ENSACLP00000023414	Mindbomb E3 ubiquitin protein ligase 1.	Mindbomb E3 ubiquitin protein ligase 2.	0.688
ENSACLP00000035689	ENSACLP00000036881	ENSACLP00000035689	ENSACLP00000036881	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	CREB binding protein a.	0.504
ENSACLP00000035689	LOC113020749	ENSACLP00000035689	ENSACLP00000041145	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	CREB binding protein b.	0.504
ENSACLP00000035689	LOC113021131	ENSACLP00000035689	ENSACLP00000021110	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	E1A binding protein p300 b.	0.534
ENSACLP00000035689	LOC113027597	ENSACLP00000035689	ENSACLP00000027808	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	E1A binding protein p300 a.	0.534
ENSACLP00000036881	ENSACLP00000035689	ENSACLP00000036881	ENSACLP00000035689	CREB binding protein a.	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	0.504
ENSACLP00000036881	LOC113020749	ENSACLP00000036881	ENSACLP00000041145	CREB binding protein a.	CREB binding protein b.	0.846
ENSACLP00000036881	LOC113021131	ENSACLP00000036881	ENSACLP00000021110	CREB binding protein a.	E1A binding protein p300 b.	0.987
ENSACLP00000036881	LOC113027597	ENSACLP00000036881	ENSACLP00000027808	CREB binding protein a.	E1A binding protein p300 a.	0.987
ENSACLP00000036881	zzef1	ENSACLP00000036881	ENSACLP00000037528	CREB binding protein a.	Zinc finger, ZZ-type with EF hand domain 1.	0.530
ENSACLP00000040635	ENSACLP00000000886	ENSACLP00000040635	ENSACLP00000000886	Dystrobrevin.	Dystrophin related protein 2.	0.644