(12 nodes) Bcl2-like network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bcl2	BCL2 apoptosis regulator b. (228 aa)
	LOC113029596	Zgc:153993. (274 aa)
	bax	Uncharacterized protein. (205 aa)
	ENSACLP00000006475	Uncharacterized protein. (165 aa)
	ENSACLP00000006599	MCL1 apoptosis regulator, BCL2 family member b. (278 aa)
	bcl2l1	BCL2 like 1. (233 aa)
	ENSACLP00000012305	BCL2 like 13. (559 aa)
	LOC113009973	BCL2 family apoptosis regulator BOK b. (222 aa)
	LOC113016700	BCL2 family apoptosis regulator BOK a. (210 aa)
	LOC113021474	Uncharacterized protein. (223 aa)
	ENSACLP00000021231	BCL2 like 10. (273 aa)
	LOC113029594	BH4_2 domain-containing protein. (198 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000006475	ENSACLP00000006599	ENSACLP00000006475	ENSACLP00000006599	Uncharacterized protein.	MCL1 apoptosis regulator, BCL2 family member b.	0.978
ENSACLP00000006475	LOC113029594	ENSACLP00000006475	ENSACLP00000025580	Uncharacterized protein.	BH4_2 domain-containing protein.	0.978
ENSACLP00000006475	LOC113029596	ENSACLP00000006475	ENSACLP00000000007	Uncharacterized protein.	Zgc:153993.	0.967
ENSACLP00000006475	bcl2	ENSACLP00000006475	ENSACLP00000033164	Uncharacterized protein.	BCL2 apoptosis regulator b.	0.978
ENSACLP00000006475	bcl2l1	ENSACLP00000006475	ENSACLP00000010478	Uncharacterized protein.	BCL2 like 1.	0.989
ENSACLP00000006599	ENSACLP00000006475	ENSACLP00000006599	ENSACLP00000006475	MCL1 apoptosis regulator, BCL2 family member b.	Uncharacterized protein.	0.978
ENSACLP00000006599	ENSACLP00000021231	ENSACLP00000006599	ENSACLP00000021231	MCL1 apoptosis regulator, BCL2 family member b.	BCL2 like 10.	0.412
ENSACLP00000006599	LOC113009973	ENSACLP00000006599	ENSACLP00000035707	MCL1 apoptosis regulator, BCL2 family member b.	BCL2 family apoptosis regulator BOK b.	0.505
ENSACLP00000006599	LOC113016700	ENSACLP00000006599	ENSACLP00000038345	MCL1 apoptosis regulator, BCL2 family member b.	BCL2 family apoptosis regulator BOK a.	0.633
ENSACLP00000006599	LOC113029594	ENSACLP00000006599	ENSACLP00000025580	MCL1 apoptosis regulator, BCL2 family member b.	BH4_2 domain-containing protein.	0.537
ENSACLP00000006599	LOC113029596	ENSACLP00000006599	ENSACLP00000000007	MCL1 apoptosis regulator, BCL2 family member b.	Zgc:153993.	0.956
ENSACLP00000006599	bax	ENSACLP00000006599	ENSACLP00000006340	MCL1 apoptosis regulator, BCL2 family member b.	Uncharacterized protein.	0.978
ENSACLP00000006599	bcl2	ENSACLP00000006599	ENSACLP00000033164	MCL1 apoptosis regulator, BCL2 family member b.	BCL2 apoptosis regulator b.	0.537
ENSACLP00000006599	bcl2l1	ENSACLP00000006599	ENSACLP00000010478	MCL1 apoptosis regulator, BCL2 family member b.	BCL2 like 1.	0.610
ENSACLP00000021231	ENSACLP00000006599	ENSACLP00000021231	ENSACLP00000006599	BCL2 like 10.	MCL1 apoptosis regulator, BCL2 family member b.	0.412
ENSACLP00000021231	LOC113029594	ENSACLP00000021231	ENSACLP00000025580	BCL2 like 10.	BH4_2 domain-containing protein.	0.541
ENSACLP00000021231	LOC113029596	ENSACLP00000021231	ENSACLP00000000007	BCL2 like 10.	Zgc:153993.	0.481
ENSACLP00000021231	bcl2	ENSACLP00000021231	ENSACLP00000033164	BCL2 like 10.	BCL2 apoptosis regulator b.	0.541
ENSACLP00000021231	bcl2l1	ENSACLP00000021231	ENSACLP00000010478	BCL2 like 10.	BCL2 like 1.	0.609
LOC113009973	ENSACLP00000006599	ENSACLP00000035707	ENSACLP00000006599	BCL2 family apoptosis regulator BOK b.	MCL1 apoptosis regulator, BCL2 family member b.	0.505