(7 nodes) Helicase/UvrB, N-terminal network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000003814	DEXH (Asp-Glu-X-His) box polypeptide 58. (677 aa)
	ENSACLP00000003839	DEXH (Asp-Glu-X-His) box polypeptide 58. (679 aa)
	ENSACLP00000010541	Uncharacterized protein. (1096 aa)
	ifih1	Interferon induced with helicase C domain 1. (992 aa)
	fancm	Uncharacterized protein. (2085 aa)
	ercc3	Excision repair cross-complementation group 3. (783 aa)
	UPF1	UPF1 RNA helicase and ATPase. (1101 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000003814	fancm	ENSACLP00000003814	ENSACLP00000023555	DEXH (Asp-Glu-X-His) box polypeptide 58.	Uncharacterized protein.	0.796
ENSACLP00000003814	ifih1	ENSACLP00000003814	ENSACLP00000019012	DEXH (Asp-Glu-X-His) box polypeptide 58.	Interferon induced with helicase C domain 1.	0.960
ENSACLP00000003839	fancm	ENSACLP00000003839	ENSACLP00000023555	DEXH (Asp-Glu-X-His) box polypeptide 58.	Uncharacterized protein.	0.796
ENSACLP00000003839	ifih1	ENSACLP00000003839	ENSACLP00000019012	DEXH (Asp-Glu-X-His) box polypeptide 58.	Interferon induced with helicase C domain 1.	0.959
ENSACLP00000010541	UPF1	ENSACLP00000010541	ENSACLP00000033452	Uncharacterized protein.	UPF1 RNA helicase and ATPase.	0.848
UPF1	ENSACLP00000010541	ENSACLP00000033452	ENSACLP00000010541	UPF1 RNA helicase and ATPase.	Uncharacterized protein.	0.848
ercc3	fancm	ENSACLP00000033230	ENSACLP00000023555	Excision repair cross-complementation group 3.	Uncharacterized protein.	0.902
fancm	ENSACLP00000003814	ENSACLP00000023555	ENSACLP00000003814	Uncharacterized protein.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.796
fancm	ENSACLP00000003839	ENSACLP00000023555	ENSACLP00000003839	Uncharacterized protein.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.796
fancm	ercc3	ENSACLP00000023555	ENSACLP00000033230	Uncharacterized protein.	Excision repair cross-complementation group 3.	0.902
fancm	ifih1	ENSACLP00000023555	ENSACLP00000019012	Uncharacterized protein.	Interferon induced with helicase C domain 1.	0.796
ifih1	ENSACLP00000003814	ENSACLP00000019012	ENSACLP00000003814	Interferon induced with helicase C domain 1.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.960
ifih1	ENSACLP00000003839	ENSACLP00000019012	ENSACLP00000003839	Interferon induced with helicase C domain 1.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.959
ifih1	fancm	ENSACLP00000019012	ENSACLP00000023555	Interferon induced with helicase C domain 1.	Uncharacterized protein.	0.796