STRINGSTRING
LOC113010654 LOC113010654 LOC113010655 LOC113010655 ykt6 ykt6 ENSACLP00000012032 ENSACLP00000012032 ap1m2 ap1m2 copz1 copz1 TRAPPC2B TRAPPC2B ENSACLP00000009309 ENSACLP00000009309 LOC113021330 LOC113021330 ap3m2 ap3m2 trappc4 trappc4 LOC113008762 LOC113008762 srpra srpra ap1m1 ap1m1 AP3S1 AP3S1 ap1s1 ap1s1 ap1s3 ap1s3 ap4s1 ap4s1 ap2s1 ap2s1 arcn1 arcn1 ENSACLP00000027992 ENSACLP00000027992 AP3S2 AP3S2 AP1S2 AP1S2 sec22a sec22a LOC113016763 LOC113016763 vamp7 vamp7 trappc2l trappc2l ap4m1 ap4m1 sec22c sec22c ENSACLP00000040511 ENSACLP00000040511
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113010654SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
LOC113010655SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (212 aa)
ykt6YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (198 aa)
ENSACLP00000012032Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (171 aa)
ap1m2AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (424 aa)
copz1Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (177 aa)
TRAPPC2BTrafficking protein particle complex 2B. (140 aa)
ENSACLP00000009309AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (434 aa)
LOC113021330Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (179 aa)
ap3m2AP-3 complex subunit mu-2. (418 aa)
trappc4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
LOC113008762Adaptor related protein complex 1 subunit mu 3; Belongs to the adaptor complexes medium subunit family. (447 aa)
srpraSRP receptor subunit alpha. (647 aa)
ap1m1AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (428 aa)
AP3S1Adaptor related protein complex 3 subunit sigma 1. (199 aa)
ap1s1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (158 aa)
ap1s3AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (194 aa)
ap4s1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (164 aa)
ap2s1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (154 aa)
arcn1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (511 aa)
ENSACLP00000027992AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (206 aa)
AP3S2Adaptor related protein complex 3 subunit sigma 2. (192 aa)
AP1S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
sec22aSEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (303 aa)
LOC113016763SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (279 aa)
vamp7Synaptobrevin-like 1; Belongs to the synaptobrevin family. (242 aa)
trappc2lTrafficking protein particle complex 2-like. (143 aa)
ap4m1AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...] (441 aa)
sec22cSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (303 aa)
ENSACLP00000040511AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (176 aa)
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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