4 items (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000036881	CREB binding protein a. (2436 aa)
	LOC113027597	E1A binding protein p300 a. (2787 aa)
	LOC113021131	E1A binding protein p300 b. (2771 aa)
	LOC113020749	CREB binding protein b. (2474 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000036881	LOC113020749	ENSACLP00000036881	ENSACLP00000041145	CREB binding protein a.	CREB binding protein b.	0.846
ENSACLP00000036881	LOC113021131	ENSACLP00000036881	ENSACLP00000021110	CREB binding protein a.	E1A binding protein p300 b.	0.987
ENSACLP00000036881	LOC113027597	ENSACLP00000036881	ENSACLP00000027808	CREB binding protein a.	E1A binding protein p300 a.	0.987
LOC113020749	ENSACLP00000036881	ENSACLP00000041145	ENSACLP00000036881	CREB binding protein b.	CREB binding protein a.	0.846
LOC113020749	LOC113021131	ENSACLP00000041145	ENSACLP00000021110	CREB binding protein b.	E1A binding protein p300 b.	0.987
LOC113020749	LOC113027597	ENSACLP00000041145	ENSACLP00000027808	CREB binding protein b.	E1A binding protein p300 a.	0.987
LOC113021131	ENSACLP00000036881	ENSACLP00000021110	ENSACLP00000036881	E1A binding protein p300 b.	CREB binding protein a.	0.987
LOC113021131	LOC113020749	ENSACLP00000021110	ENSACLP00000041145	E1A binding protein p300 b.	CREB binding protein b.	0.987
LOC113027597	ENSACLP00000036881	ENSACLP00000027808	ENSACLP00000036881	E1A binding protein p300 a.	CREB binding protein a.	0.987
LOC113027597	LOC113020749	ENSACLP00000027808	ENSACLP00000041145	E1A binding protein p300 a.	CREB binding protein b.	0.987