(93 nodes) Zinc finger, CCHC-type superfamily network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSACLP00000000415	Uncharacterized protein. (1742 aa)
	ENSACLP00000035848	Uncharacterized protein. (342 aa)
	ENSACLP00000036017	CCHC-type domain-containing protein. (452 aa)
	ENSACLP00000036343	Uncharacterized protein. (1310 aa)
	ENSACLP00000038046	Uncharacterized protein. (1491 aa)
	ENSACLP00000038356	CCHC-type domain-containing protein. (540 aa)
	ENSACLP00000038817	Uncharacterized protein. (1245 aa)
	ENSACLP00000038862	CCHC-type domain-containing protein. (466 aa)
	ENSACLP00000039862	Uncharacterized protein. (1492 aa)
	ENSACLP00000040507	Uncharacterized protein. (1575 aa)
	ENSACLP00000040893	CCHC-type domain-containing protein. (351 aa)
	ENSACLP00000041018	Uncharacterized protein. (1137 aa)
	LIN28A	Lin-28 homolog A. (202 aa)
	ENSACLP00000022594	CCHC-type domain-containing protein. (306 aa)
	ENSACLP00000021860	Uncharacterized protein. (1579 aa)
	ENSACLP00000021847	CCHC-type domain-containing protein. (128 aa)
	ENSACLP00000021497	Uncharacterized protein. (1461 aa)
	zcchc7	Zinc finger, CCHC domain containing 7. (645 aa)
	cnbp	CCHC-type zinc finger, nucleic acid binding protein b. (161 aa)
	LOC113006609	Uncharacterized protein. (488 aa)
	ENSACLP00000021109	Uncharacterized protein. (584 aa)
	ENSACLP00000020614	Uncharacterized protein. (213 aa)
	zcchc24	Zinc finger, CCHC domain containing 24. (239 aa)
	LOC113021785	Uncharacterized protein. (1868 aa)
	recql4	RecQ helicase-like 4. (1577 aa)
	ENSACLP00000017357	CCHC-type domain-containing protein. (491 aa)
	ENSACLP00000017353	Zinc finger, CCHC domain containing 10. (203 aa)
	ENSACLP00000016659	CCHC-type domain-containing protein. (309 aa)
	ENSACLP00000016604	Uncharacterized protein. (209 aa)
	ENSACLP00000016590	Uncharacterized protein. (165 aa)
	ENSACLP00000015794	CCHC-type domain-containing protein. (400 aa)
	ENSACLP00000015255	CCHC-type domain-containing protein. (440 aa)
	cpsf4	Cleavage and polyadenylation specific factor 4. (265 aa)
	ENSACLP00000015032	Uncharacterized protein. (216 aa)
	ENSACLP00000014734	Uncharacterized protein. (1236 aa)
	ENSACLP00000014090	CCHC-type domain-containing protein. (672 aa)
	ENSACLP00000014089	Uncharacterized protein. (1491 aa)
	ENSACLP00000013222	Zinc finger, CCHC domain containing 9. (287 aa)
	ENSACLP00000013095	CCHC-type domain-containing protein. (520 aa)
	ENSACLP00000011544	CCHC-type domain-containing protein. (466 aa)
	LOC113012631	Uncharacterized protein. (660 aa)
	ENSACLP00000010119	CCHC-type zinc finger, nucleic acid binding protein a. (160 aa)
	ENSACLP00000010077	CCHC-type domain-containing protein. (474 aa)
	ENSACLP00000009721	Integrase catalytic domain-containing protein. (598 aa)
	LOC113028548	CCHC-type domain-containing protein. (154 aa)
	LOC113013700	Uncharacterized protein. (666 aa)
	ENSACLP00000007279	Uncharacterized protein. (706 aa)
	ENSACLP00000006766	Uncharacterized protein. (1005 aa)
	zcchc2	CCHC-type domain-containing protein. (1081 aa)
	ENSACLP00000005450	CCHC-type domain-containing protein. (460 aa)
	ENSACLP00000004400	CCHC-type domain-containing protein. (475 aa)
	ENSACLP00000004361	CCHC-type domain-containing protein. (553 aa)
	LOC113016920	Uncharacterized protein. (1343 aa)
	ENSACLP00000004186	CCHC-type domain-containing protein. (84 aa)
	ENSACLP00000003732	Uncharacterized protein. (702 aa)
	ENSACLP00000003338	CCHC-type domain-containing protein. (491 aa)
	LOC113007139	Uncharacterized protein. (1333 aa)
	ENSACLP00000003265	Uncharacterized protein. (1171 aa)
	ENSACLP00000003191	Integrase catalytic domain-containing protein. (1513 aa)
	ENSACLP00000002383	CCHC-type domain-containing protein. (476 aa)
	ENSACLP00000002272	Uncharacterized protein. (996 aa)
	zcrb1	Zinc finger CCHC-type and RNA binding motif 1. (250 aa)
	ENSACLP00000000672	Uncharacterized protein. (1579 aa)
	ENSACLP00000035558	Uncharacterized protein. (1491 aa)
	zcchc8	Zinc finger, CCHC domain containing 8. (777 aa)
	TUT4	Terminal uridylyl transferase 4. (1524 aa)
	ENSACLP00000034257	Uncharacterized protein. (753 aa)
	ENSACLP00000032715	CCHC-type domain-containing protein. (654 aa)
	ENSACLP00000032241	CCHC-type domain-containing protein. (353 aa)
	ENSACLP00000032192	CCHC-type domain-containing protein. (466 aa)
	lin28b	Lin-28 homolog B (C. elegans). (236 aa)
	ENSACLP00000030871	Zinc finger, CCHC domain containing 14. (729 aa)
	ENSACLP00000029921	CCHC-type domain-containing protein. (503 aa)
	ENSACLP00000029392	Uncharacterized protein. (157 aa)
	ENSACLP00000029318	Uncharacterized protein. (1470 aa)
	ENSACLP00000029215	Uncharacterized protein. (411 aa)
	ENSACLP00000029200	Uncharacterized protein. (149 aa)
	ENSACLP00000029141	Uncharacterized protein. (484 aa)
	ENSACLP00000029117	Uncharacterized protein. (415 aa)
	ENSACLP00000027577	CCHC-type domain-containing protein. (332 aa)
	ENSACLP00000027487	Uncharacterized protein. (861 aa)
	ENSACLP00000026934	Uncharacterized protein. (1343 aa)
	TUT7	Terminal uridylyl transferase 7. (764 aa)
	ENSACLP00000026535	Uncharacterized protein. (1504 aa)
	ENSACLP00000026189	Uncharacterized protein. (1579 aa)
	ENSACLP00000025211	Uncharacterized protein. (1494 aa)
	LOC113018405	Uncharacterized protein. (1357 aa)
	ENSACLP00000023737	Uncharacterized protein. (608 aa)
	ENSACLP00000023670	Uncharacterized protein. (568 aa)
	ENSACLP00000023452	Uncharacterized protein. (172 aa)
	ENSACLP00000023373	Uncharacterized protein. (206 aa)
	ENSACLP00000023154	Uncharacterized protein. (817 aa)
	ENSACLP00000022622	Uncharacterized protein. (1870 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000000415	cpsf4	ENSACLP00000000415	ENSACLP00000015241	Uncharacterized protein.	Cleavage and polyadenylation specific factor 4.	0.984
ENSACLP00000015032	cpsf4	ENSACLP00000015032	ENSACLP00000015241	Uncharacterized protein.	Cleavage and polyadenylation specific factor 4.	0.984
LIN28A	TUT4	ENSACLP00000041250	ENSACLP00000034400	Lin-28 homolog A.	Terminal uridylyl transferase 4.	0.525
LIN28A	TUT7	ENSACLP00000041250	ENSACLP00000026801	Lin-28 homolog A.	Terminal uridylyl transferase 7.	0.525
LOC113006609	zcchc7	ENSACLP00000021182	ENSACLP00000021364	Uncharacterized protein.	Zinc finger, CCHC domain containing 7.	0.860
LOC113006609	zcchc8	ENSACLP00000021182	ENSACLP00000034762	Uncharacterized protein.	Zinc finger, CCHC domain containing 8.	0.457
TUT4	LIN28A	ENSACLP00000034400	ENSACLP00000041250	Terminal uridylyl transferase 4.	Lin-28 homolog A.	0.525
TUT4	lin28b	ENSACLP00000034400	ENSACLP00000031801	Terminal uridylyl transferase 4.	Lin-28 homolog B (C. elegans).	0.469
TUT7	LIN28A	ENSACLP00000026801	ENSACLP00000041250	Terminal uridylyl transferase 7.	Lin-28 homolog A.	0.525
TUT7	lin28b	ENSACLP00000026801	ENSACLP00000031801	Terminal uridylyl transferase 7.	Lin-28 homolog B (C. elegans).	0.469
cpsf4	ENSACLP00000000415	ENSACLP00000015241	ENSACLP00000000415	Cleavage and polyadenylation specific factor 4.	Uncharacterized protein.	0.984
cpsf4	ENSACLP00000015032	ENSACLP00000015241	ENSACLP00000015032	Cleavage and polyadenylation specific factor 4.	Uncharacterized protein.	0.984
lin28b	TUT4	ENSACLP00000031801	ENSACLP00000034400	Lin-28 homolog B (C. elegans).	Terminal uridylyl transferase 4.	0.469
lin28b	TUT7	ENSACLP00000031801	ENSACLP00000026801	Lin-28 homolog B (C. elegans).	Terminal uridylyl transferase 7.	0.469
zcchc7	LOC113006609	ENSACLP00000021364	ENSACLP00000021182	Zinc finger, CCHC domain containing 7.	Uncharacterized protein.	0.860
zcchc7	zcchc8	ENSACLP00000021364	ENSACLP00000034762	Zinc finger, CCHC domain containing 7.	Zinc finger, CCHC domain containing 8.	0.457
zcchc8	LOC113006609	ENSACLP00000034762	ENSACLP00000021182	Zinc finger, CCHC domain containing 8.	Uncharacterized protein.	0.457
zcchc8	zcchc7	ENSACLP00000034762	ENSACLP00000021364	Zinc finger, CCHC domain containing 8.	Zinc finger, CCHC domain containing 7.	0.457