(30 nodes) ABC transporter transmembrane region network (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113010125	ATP-binding cassette, sub-family B (MDR/TAP), member 8. (709 aa)
	ENSACLP00000034617	Transporter associated with antigen processing, subunit type t, teleost specific. (542 aa)
	LOC113016220	ATP-binding cassette, sub-family B (MDR/TAP), member 11b. (1356 aa)
	LOC113016994	ATP-binding cassette, sub-family C (CFTR/MRP), member 4. (1321 aa)
	ENSACLP00000039172	Uncharacterized protein. (1219 aa)
	ENSACLP00000039648	Uncharacterized protein. (1291 aa)
	LOC113015682	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (852 aa)
	LOC113015683	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (852 aa)
	LOC113027693	ATP-binding cassette, sub-family C (CFTR/MRP), member 3. (1542 aa)
	ENSACLP00000031135	Uncharacterized protein. (1322 aa)
	ENSACLP00000031033	ATP-binding cassette, sub-family C (CFTR/MRP), member 12. (1368 aa)
	ENSACLP00000029303	Transporter associated with antigen processing, subunit type a. (699 aa)
	LOC113017376	Uncharacterized protein. (751 aa)
	ENSACLP00000025203	ATP-binding cassette, sub-family B (MDR/TAP), member 4. (1251 aa)
	ENSACLP00000024907	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a. (1513 aa)
	abcc10	ATP-binding cassette, sub-family C (CFTR/MRP), member 10. (1546 aa)
	ENSACLP00000019429	ATP-binding cassette, sub-family C (CFTR/MRP), member 9. (1525 aa)
	abcb11	ATP-binding cassette, sub-family B (MDR/TAP), member 11a. (1264 aa)
	LOC113021478	ATP-binding cassette, sub-family C (CFTR/MRP), member 1. (1510 aa)
	ENSACLP00000014352	ATP-binding cassette, sub-family C (CFTR/MRP), member 5. (1371 aa)
	ENSACLP00000013581	Uncharacterized protein. (1313 aa)
	abcb10	ATP-binding cassette, sub-family B (MDR/TAP), member 10. (720 aa)
	ENSACLP00000013007	ABC transmembrane type-1 domain-containing protein. (352 aa)
	tap1	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (738 aa)
	ENSACLP00000012822	Uncharacterized protein. (1568 aa)
	ABCC4	ATP binding cassette subfamily C member 4. (1206 aa)
	abcb7	ATP-binding cassette, sub-family B (MDR/TAP), member 7. (746 aa)
	abcb9	ATP-binding cassette, sub-family B (MDR/TAP), member 9. (799 aa)
	ENSACLP00000005550	ATP-binding cassette, sub-family C (CFTR/MRP), member 8. (1562 aa)
	LOC113008737	Si:ch211-221f10.2. (1392 aa)

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC4	ENSACLP00000025203	ENSACLP00000011113	ENSACLP00000025203	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 4.	0.458
ABCC4	ENSACLP00000039172	ENSACLP00000011113	ENSACLP00000039172	ATP binding cassette subfamily C member 4.	Uncharacterized protein.	0.817
ABCC4	ENSACLP00000039648	ENSACLP00000011113	ENSACLP00000039648	ATP binding cassette subfamily C member 4.	Uncharacterized protein.	0.817
ABCC4	LOC113015682	ENSACLP00000011113	ENSACLP00000041402	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ABCC4	LOC113015683	ENSACLP00000011113	ENSACLP00000041424	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ABCC4	LOC113016220	ENSACLP00000011113	ENSACLP00000038554	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 11b.	0.458
ABCC4	LOC113016994	ENSACLP00000011113	ENSACLP00000039018	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family C (CFTR/MRP), member 4.	0.816
ABCC4	abcb11	ENSACLP00000011113	ENSACLP00000017148	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	0.458
ABCC4	abcb7	ENSACLP00000011113	ENSACLP00000008822	ATP binding cassette subfamily C member 4.	ATP-binding cassette, sub-family B (MDR/TAP), member 7.	0.448
ENSACLP00000005550	ENSACLP00000025203	ENSACLP00000005550	ENSACLP00000025203	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 4.	0.458
ENSACLP00000005550	LOC113015682	ENSACLP00000005550	ENSACLP00000041402	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ENSACLP00000005550	LOC113015683	ENSACLP00000005550	ENSACLP00000041424	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ENSACLP00000005550	LOC113016220	ENSACLP00000005550	ENSACLP00000038554	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 11b.	0.458
ENSACLP00000005550	abcb11	ENSACLP00000005550	ENSACLP00000017148	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	0.458
ENSACLP00000005550	abcb7	ENSACLP00000005550	ENSACLP00000008822	ATP-binding cassette, sub-family C (CFTR/MRP), member 8.	ATP-binding cassette, sub-family B (MDR/TAP), member 7.	0.448
ENSACLP00000012822	ENSACLP00000025203	ENSACLP00000012822	ENSACLP00000025203	Uncharacterized protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 4.	0.458
ENSACLP00000012822	LOC113015682	ENSACLP00000012822	ENSACLP00000041402	Uncharacterized protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ENSACLP00000012822	LOC113015683	ENSACLP00000012822	ENSACLP00000041424	Uncharacterized protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.433
ENSACLP00000012822	LOC113016220	ENSACLP00000012822	ENSACLP00000038554	Uncharacterized protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 11b.	0.458
ENSACLP00000012822	abcb11	ENSACLP00000012822	ENSACLP00000017148	Uncharacterized protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	0.458