6 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484BYY3	Uncharacterized protein. (174 aa)
	A0A484C2D0	Uncharacterized protein. (374 aa)
	A0A484CW42	Uncharacterized protein. (1494 aa)
	A0A484CXS4	Uncharacterized protein. (566 aa)
	A0A484DEJ0	Uncharacterized protein. (1486 aa)
	A0A484DIP0	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYY3	A0A484C2D0	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A484BYY3	A0A484CXS4	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A484BYY3	A0A484DEJ0	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A484BYY3	A0A484DIP0	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.778
A0A484C2D0	A0A484BYY3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A484C2D0	A0A484CW42	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A484C2D0	A0A484DEJ0	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A484C2D0	A0A484DIP0	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.978
A0A484CW42	A0A484C2D0	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A484CW42	A0A484CXS4	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A484CW42	A0A484DEJ0	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A484CW42	A0A484DIP0	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.778
A0A484CXS4	A0A484BYY3	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A484CXS4	A0A484CW42	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A484CXS4	A0A484DEJ0	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A484CXS4	A0A484DIP0	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.983
A0A484DEJ0	A0A484BYY3	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A484DEJ0	A0A484C2D0	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A484DEJ0	A0A484CW42	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A484DEJ0	A0A484CXS4	Uncharacterized protein.	Uncharacterized protein.	0.945