20 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484C2P1	Protein kinase domain-containing protein. (688 aa)
	A0A484C5I6	Protein kinase domain-containing protein. (411 aa)
	A0A484CDR7	Uncharacterized protein. (191 aa)
	A0A484CE68	Uncharacterized protein. (214 aa)
	A0A484CGD5	Protein kinase domain-containing protein. (327 aa)
	A0A484CLR9	Protein kinase domain-containing protein. (543 aa)
	A0A484CN08	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (477 aa)
	A0A484CV03	XK-related protein. (474 aa)
	A0A484D2V6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (489 aa)
	A0A484D494	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (412 aa)
	A0A484D4L6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (482 aa)
	A0A484DAW0	Uncharacterized protein. (193 aa)
	A0A484DBL7	Uncharacterized protein. (426 aa)
	A0A484DDI2	Protein kinase domain-containing protein. (415 aa)
	A0A484DEI4	Protein kinase domain-containing protein. (409 aa)
	A0A484DEL6	Uncharacterized protein. (155 aa)
	A0A484DGY6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	A0A484DHA8	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	A0A484DNY2	Uncharacterized protein. (153 aa)
	A0A484DRC5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (440 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C2P1	A0A484C5I6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.416
A0A484C2P1	A0A484CDR7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.440
A0A484C2P1	A0A484CE68	Protein kinase domain-containing protein.	Uncharacterized protein.	0.440
A0A484C2P1	A0A484CGD5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.904
A0A484C2P1	A0A484CLR9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.569
A0A484C2P1	A0A484CN08	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.710
A0A484C2P1	A0A484CV03	Protein kinase domain-containing protein.	XK-related protein.	0.606
A0A484C2P1	A0A484D2V6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.696
A0A484C2P1	A0A484D494	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.414
A0A484C2P1	A0A484D4L6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.423
A0A484C2P1	A0A484DAW0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.440
A0A484C2P1	A0A484DBL7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.519
A0A484C2P1	A0A484DDI2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.419
A0A484C2P1	A0A484DEL6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.876
A0A484C2P1	A0A484DGY6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.414
A0A484C2P1	A0A484DHA8	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.898
A0A484C2P1	A0A484DNY2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.884
A0A484C5I6	A0A484C2P1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.416
A0A484C5I6	A0A484CDR7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.461
A0A484C5I6	A0A484CE68	Protein kinase domain-containing protein.	Uncharacterized protein.	0.461