48 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484CP81	Uncharacterized protein. (137 aa)
	A0A484CRY3	Uncharacterized protein. (810 aa)
	A0A484CTT5	Uncharacterized protein. (228 aa)
	A0A484D231	Uncharacterized protein. (551 aa)
	A0A484DQ17	Uncharacterized protein. (5664 aa)
	A0A484DPJ7	Uncharacterized protein. (1252 aa)
	A0A484DN16	TPR_REGION domain-containing protein. (534 aa)
	A0A484DKA5	Uncharacterized protein. (537 aa)
	A0A484DH78	Uncharacterized protein. (2024 aa)
	A0A484DH25	CCDC66 domain-containing protein. (918 aa)
	A0A484DFG8	Uncharacterized protein. (350 aa)
	A0A484DF88	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (827 aa)
	A0A484DD92	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (3254 aa)
	A0A484DD33	PDZ domain-containing protein. (173 aa)
	A0A484DBG4	Uncharacterized protein. (1519 aa)
	A0A484DBE7	PDZ domain-containing protein. (246 aa)
	A0A484DAY5	PDZ domain-containing protein. (560 aa)
	A0A484D9T2	Ubiquitin carboxyl-terminal hydrolase. (806 aa)
	A0A484D8P6	Uncharacterized protein. (193 aa)
	A0A484D7S3	Uncharacterized protein. (225 aa)
	A0A484D5D2	Uncharacterized protein. (332 aa)
	A0A484D3L5	Uncharacterized protein. (1087 aa)
	A0A484D298	Uncharacterized protein. (795 aa)
	A0A484D127	Receptor expression-enhancing protein. (235 aa)
	A0A484D079	Uncharacterized protein. (1036 aa)
	A0A484CZW3	Guanylate kinase-like domain-containing protein. (208 aa)
	A0A484CZD0	Uncharacterized protein. (271 aa)
	A0A484CYU2	F5/8 type C domain-containing protein. (272 aa)
	A0A484CVG8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1324 aa)
	A0A484CUY5	DAGKc domain-containing protein. (556 aa)
	A0A484CUL7	Guanylate kinase-like domain-containing protein. (252 aa)
	A0A484CUJ3	Uncharacterized protein. (741 aa)
	A0A484BY47	Uncharacterized protein. (267 aa)
	A0A484BZA1	Uncharacterized protein. (1335 aa)
	A0A484C3L4	Uncharacterized protein. (189 aa)
	A0A484C3N6	Uncharacterized protein; Belongs to the MAGUK family. (670 aa)
	A0A484C4Y5	Receptor expression-enhancing protein. (225 aa)
	A0A484C776	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1860 aa)
	A0A484C9B6	Uncharacterized protein. (214 aa)
	A0A484C9V6	Uncharacterized protein. (1437 aa)
	A0A484CA90	Uncharacterized protein. (319 aa)
	A0A484CAF4	Uncharacterized protein. (978 aa)
	A0A484CCJ8	Uncharacterized protein. (562 aa)
	A0A484CCW8	Uncharacterized protein. (723 aa)
	A0A484CD17	Uncharacterized protein. (972 aa)
	A0A484CFN0	Uncharacterized protein; Belongs to the MAGUK family. (650 aa)
	A0A484CGL3	Uncharacterized protein. (206 aa)
	A0A484CIQ3	Uncharacterized protein. (203 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BY47	A0A484CRY3	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A484BY47	A0A484DH25	Uncharacterized protein.	CCDC66 domain-containing protein.	0.698
A0A484BY47	A0A484DN16	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.609
A0A484BZA1	A0A484CUL7	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.523
A0A484BZA1	A0A484CZW3	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.523
A0A484C3L4	A0A484C3N6	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.438
A0A484C3L4	A0A484C776	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.695
A0A484C3L4	A0A484CFN0	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.438
A0A484C3L4	A0A484CP81	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A484C3L4	A0A484CUL7	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.837
A0A484C3L4	A0A484CVG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.695
A0A484C3L4	A0A484CZW3	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.919
A0A484C3L4	A0A484D5D2	Uncharacterized protein.	Uncharacterized protein.	0.906
A0A484C3L4	A0A484DFG8	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A484C3N6	A0A484C3L4	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.438
A0A484C3N6	A0A484CCW8	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.773
A0A484C3N6	A0A484CD17	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.773
A0A484C3N6	A0A484CFN0	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.845
A0A484C3N6	A0A484CIQ3	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.449
A0A484C3N6	A0A484CP81	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.427