57 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484BYY3	Uncharacterized protein. (174 aa)
	A0A484BZF0	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (817 aa)
	A0A484C0P8	Uncharacterized protein. (1080 aa)
	A0A484C138	SSD domain-containing protein. (925 aa)
	A0A484C1I7	Uncharacterized protein. (1632 aa)
	A0A484C1J4	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
	A0A484C3B4	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (457 aa)
	A0A484C3D1	Uncharacterized protein. (342 aa)
	A0A484C3H3	Uncharacterized protein. (1172 aa)
	A0A484C3W7	Uncharacterized protein. (802 aa)
	A0A484C4I6	SSD domain-containing protein. (1499 aa)
	A0A484C878	SSD domain-containing protein. (374 aa)
	A0A484C8I8	SSD domain-containing protein. (524 aa)
	A0A484CD04	Uncharacterized protein. (695 aa)
	A0A484CDI3	SSD domain-containing protein. (1282 aa)
	A0A484CGM4	Uncharacterized protein. (210 aa)
	A0A484CGZ7	Uncharacterized protein. (410 aa)
	A0A484CIQ9	Uncharacterized protein. (114 aa)
	A0A484CK37	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (501 aa)
	A0A484CK60	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
	A0A484CM18	Uncharacterized protein. (914 aa)
	A0A484CND5	Uncharacterized protein. (588 aa)
	A0A484CPH1	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (398 aa)
	A0A484CQN1	TROVE domain-containing protein. (587 aa)
	A0A484CQU2	Uncharacterized protein. (262 aa)
	A0A484CR60	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
	A0A484CS21	Protein kinase domain-containing protein. (1128 aa)
	A0A484CS67	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (607 aa)
	A0A484CTU5	SSD domain-containing protein. (1484 aa)
	A0A484CVI7	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (446 aa)
	A0A484CVI9	Uncharacterized protein. (1317 aa)
	A0A484CW42	Uncharacterized protein. (1494 aa)
	A0A484CWF1	Uncharacterized protein. (1112 aa)
	A0A484CWM5	Uncharacterized protein. (713 aa)
	A0A484CYM6	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (345 aa)
	A0A484CZF7	Peptidylprolyl isomerase. (404 aa)
	A0A484D0Z0	Uncharacterized protein. (937 aa)
	A0A484D253	Uncharacterized protein. (203 aa)
	A0A484D2K1	Uncharacterized protein. (262 aa)
	A0A484D329	Ubiquitin-like domain-containing protein. (760 aa)
	A0A484D398	Peptidylprolyl isomerase. (477 aa)
	A0A484D5B3	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (460 aa)
	A0A484DAQ0	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (582 aa)
	A0A484DBS7	SSD domain-containing protein. (1541 aa)
	A0A484DC95	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (348 aa)
	A0A484DCZ0	Uncharacterized protein. (222 aa)
	A0A484DEJ0	Uncharacterized protein. (1486 aa)
	A0A484DFR1	Uncharacterized protein. (964 aa)
	A0A484DFY8	Uncharacterized protein. (1388 aa)
	A0A484DH14	ABC_transp_aux domain-containing protein. (457 aa)
	A0A484DHC1	WD_REPEATS_REGION domain-containing protein. (810 aa)
	A0A484DKH7	Uncharacterized protein. (188 aa)
	A0A484DL99	Uncharacterized protein. (557 aa)
	A0A484DLL5	Uncharacterized protein. (1357 aa)
	A0A484DP41	Uncharacterized protein. (1020 aa)
	A0A484DPJ8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (469 aa)
	A0A484BY38	Uncharacterized protein. (411 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BY38	A0A484BZF0	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.522
A0A484BY38	A0A484C1J4	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.414
A0A484BY38	A0A484CR60	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.414
A0A484BY38	A0A484DFR1	Uncharacterized protein.	Uncharacterized protein.	0.415
A0A484BY38	A0A484DH14	Uncharacterized protein.	ABC_transp_aux domain-containing protein.	0.743
A0A484BY38	A0A484DKH7	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A484BYY3	A0A484BZF0	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.774
A0A484BYY3	A0A484C1I7	Uncharacterized protein.	Uncharacterized protein.	0.811
A0A484BYY3	A0A484C1J4	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.491
A0A484BYY3	A0A484C3B4	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.430
A0A484BYY3	A0A484C3H3	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A484BYY3	A0A484CGZ7	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A484BYY3	A0A484CND5	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A484BYY3	A0A484CR60	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.491
A0A484BYY3	A0A484CS21	Uncharacterized protein.	Protein kinase domain-containing protein.	0.871
A0A484BYY3	A0A484CTU5	Uncharacterized protein.	SSD domain-containing protein.	0.686
A0A484BYY3	A0A484CVI7	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.430
A0A484BYY3	A0A484CVI9	Uncharacterized protein.	Uncharacterized protein.	0.574
A0A484BYY3	A0A484D5B3	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.486
A0A484BYY3	A0A484DBS7	Uncharacterized protein.	SSD domain-containing protein.	0.654