64 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484D7U2	Uncharacterized protein. (688 aa)
	A0A484BYD2	Protein kinase domain-containing protein. (152 aa)
	A0A484BZ77	Uncharacterized protein; Belongs to the MAGUK family. (691 aa)
	A0A484C068	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (254 aa)
	A0A484C0Q2	LEM domain-containing protein. (573 aa)
	A0A484C0U6	Uncharacterized protein. (601 aa)
	A0A484C1A6	Extracellular sulfatase. (909 aa)
	A0A484C3T5	Protein kinase domain-containing protein. (223 aa)
	A0A484C5S8	MSC domain-containing protein. (296 aa)
	A0A484C6Q8	Uncharacterized protein. (288 aa)
	A0A484C7N0	Uncharacterized protein. (467 aa)
	A0A484C886	Noggin; Belongs to the noggin family. (211 aa)
	A0A484CAM6	Uncharacterized protein. (112 aa)
	A0A484CCB9	EMI domain-containing protein. (908 aa)
	A0A484CD70	SERPIN domain-containing protein; Belongs to the serpin family. (465 aa)
	A0A484CE42	Mothers against decapentaplegic homolog. (376 aa)
	A0A484CFZ7	Uncharacterized protein. (777 aa)
	A0A484CG75	Uncharacterized protein. (1018 aa)
	A0A484CGZ6	E3 ubiquitin-protein ligase. (729 aa)
	A0A484CHE7	Uncharacterized protein. (353 aa)
	A0A484CHQ4	Noggin; Belongs to the noggin family. (222 aa)
	A0A484CHU3	Dickkopf_N domain-containing protein. (253 aa)
	A0A484CKS5	E3 ubiquitin-protein ligase. (774 aa)
	A0A484CLA4	c-SKI_SMAD_bind domain-containing protein. (805 aa)
	A0A484CLM7	CTCK domain-containing protein. (208 aa)
	A0A484CLS2	Uncharacterized protein. (444 aa)
	A0A484CMR5	Uncharacterized protein. (383 aa)
	A0A484CNY1	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (549 aa)
	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family. (951 aa)
	A0A484CSK3	MIT domain-containing protein. (547 aa)
	A0A484CSN0	Uncharacterized protein. (306 aa)
	A0A484CTU3	c-SKI_SMAD_bind domain-containing protein. (768 aa)
	A0A484CUU3	Uncharacterized protein. (299 aa)
	A0A484CVK9	VWFC domain-containing protein. (231 aa)
	A0A484CWL0	Uncharacterized protein. (362 aa)
	A0A484CYA1	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (418 aa)
	A0A484CZ92	Uncharacterized protein. (248 aa)
	A0A484D0D4	FCP1 homology domain-containing protein. (379 aa)
	A0A484D0R6	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (541 aa)
	A0A484D2Q2	FCP1 homology domain-containing protein. (474 aa)
	A0A484D4E6	Mothers against decapentaplegic homolog. (492 aa)
	A0A484D6L0	c-SKI_SMAD_bind domain-containing protein. (757 aa)
	A0A484D6U2	Uncharacterized protein. (807 aa)
	A0A484D7G6	CTCK domain-containing protein. (216 aa)
	A0A484D920	SEFIR domain-containing protein. (600 aa)
	A0A484DCG8	TGF_BETA_2 domain-containing protein. (453 aa)
	A0A484DEA6	c-SKI_SMAD_bind domain-containing protein. (691 aa)
	A0A484DFX6	CTCK domain-containing protein. (259 aa)
	A0A484DGI0	SEFIR domain-containing protein. (833 aa)
	A0A484DHD9	Extracellular sulfatase. (896 aa)
	A0A484DHH4	MIT domain-containing protein. (624 aa)
	A0A484DHK3	Uncharacterized protein. (1263 aa)
	A0A484DIE0	Chordin; Belongs to the chordin family. (951 aa)
	A0A484DIF2	Uncharacterized protein. (2233 aa)
	A0A484DIJ3	Uncharacterized protein. (341 aa)
	A0A484DIW2	Uncharacterized protein. (544 aa)
	A0A484DJQ1	Uncharacterized protein. (392 aa)
	A0A484DLC0	E3 ubiquitin-protein ligase. (760 aa)
	A0A484DM48	Uncharacterized protein. (295 aa)
	A0A484DMG7	Uncharacterized protein. (489 aa)
	A0A484DN93	Mothers against decapentaplegic homolog. (503 aa)
	A0A484DNF5	c-SKI_SMAD_bind domain-containing protein. (743 aa)
	A0A484DNU1	FCP1 homology domain-containing protein. (477 aa)
	A0A484DRZ2	Uncharacterized protein. (1160 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYD2	A0A484BZ77	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.976
A0A484BYD2	A0A484C1A6	Protein kinase domain-containing protein.	Extracellular sulfatase.	0.425
A0A484BYD2	A0A484C3T5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.987
A0A484BYD2	A0A484CCB9	Protein kinase domain-containing protein.	EMI domain-containing protein.	0.494
A0A484BYD2	A0A484CLS2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.502
A0A484BYD2	A0A484CS61	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.858
A0A484BYD2	A0A484D6U2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.425
A0A484BYD2	A0A484DHD9	Protein kinase domain-containing protein.	Extracellular sulfatase.	0.425
A0A484BZ77	A0A484BYD2	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase domain-containing protein.	0.976
A0A484BZ77	A0A484C1A6	Uncharacterized protein; Belongs to the MAGUK family.	Extracellular sulfatase.	0.425
A0A484BZ77	A0A484C3T5	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase domain-containing protein.	0.979
A0A484BZ77	A0A484CCB9	Uncharacterized protein; Belongs to the MAGUK family.	EMI domain-containing protein.	0.494
A0A484BZ77	A0A484CLS2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.502
A0A484BZ77	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.858
A0A484BZ77	A0A484D6U2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.425
A0A484BZ77	A0A484DHD9	Uncharacterized protein; Belongs to the MAGUK family.	Extracellular sulfatase.	0.425
A0A484C068	A0A484CE42	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.	Mothers against decapentaplegic homolog.	0.783
A0A484C068	A0A484D4E6	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.	Mothers against decapentaplegic homolog.	0.783
A0A484C068	A0A484DIF2	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.	Uncharacterized protein.	0.570
A0A484C068	A0A484DIJ3	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.	Uncharacterized protein.	0.621