14 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484C8K5	Uncharacterized protein; Belongs to the MAGUK family. (586 aa)
	A0A484BYS6	Uncharacterized protein. (593 aa)
	A0A484CH94	Uncharacterized protein; Belongs to the MAGUK family. (551 aa)
	A0A484CHJ0	Uncharacterized protein; Belongs to the MAGUK family. (653 aa)
	A0A484BZ77	Uncharacterized protein; Belongs to the MAGUK family. (691 aa)
	A0A484CJ65	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (214 aa)
	A0A484CKF9	Uncharacterized protein; Belongs to the MAGUK family. (584 aa)
	A0A484CRM0	Uncharacterized protein; Belongs to the MAGUK family. (606 aa)
	A0A484CRR2	Uncharacterized protein; Belongs to the MAGUK family. (604 aa)
	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family. (951 aa)
	A0A484D9V4	Uncharacterized protein; Belongs to the MAGUK family. (550 aa)
	A0A484DR90	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (201 aa)
	A0A484C2F5	Uncharacterized protein; Belongs to the MAGUK family. (547 aa)
	A0A484C7U2	Uncharacterized protein; Belongs to the MAGUK family. (576 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYS6	A0A484BZ77	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.506
A0A484BYS6	A0A484CJ65	Uncharacterized protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.674
A0A484BYS6	A0A484CS61	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.506
A0A484BYS6	A0A484DR90	Uncharacterized protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.674
A0A484BZ77	A0A484BYS6	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.506
A0A484BZ77	A0A484C2F5	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.516
A0A484BZ77	A0A484C7U2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.523
A0A484BZ77	A0A484C8K5	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.523
A0A484BZ77	A0A484CH94	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.517
A0A484BZ77	A0A484CHJ0	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.523
A0A484BZ77	A0A484CJ65	Uncharacterized protein; Belongs to the MAGUK family.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.998
A0A484BZ77	A0A484CKF9	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.518
A0A484BZ77	A0A484CRM0	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.506
A0A484BZ77	A0A484CRR2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.523
A0A484BZ77	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.858
A0A484BZ77	A0A484D9V4	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.518
A0A484BZ77	A0A484DR90	Uncharacterized protein; Belongs to the MAGUK family.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.998
A0A484C2F5	A0A484BZ77	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.516
A0A484C2F5	A0A484CJ65	Uncharacterized protein; Belongs to the MAGUK family.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.850
A0A484C2F5	A0A484CS61	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.506