64 items (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A484BYD9	DNA-binding protein SATB. (827 aa)
	A0A484DRN1	Uncharacterized protein. (544 aa)
	A0A484DP57	Uncharacterized protein. (396 aa)
	A0A484DN38	Uncharacterized protein. (389 aa)
	A0A484DMF3	Chromo domain-containing protein. (401 aa)
	A0A484DLN1	Chromo domain-containing protein. (577 aa)
	A0A484DKV8	VEFS-Box domain-containing protein. (693 aa)
	A0A484DKU9	Small ubiquitin-related modifier. (96 aa)
	A0A484DHY9	Uncharacterized protein. (719 aa)
	A0A484DGE3	Uncharacterized protein. (396 aa)
	A0A484DEH2	Dimer_Tnp_hAT domain-containing protein. (428 aa)
	A0A484DEF1	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (320 aa)
	A0A484DBN0	Uncharacterized protein. (687 aa)
	A0A484DAB4	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (414 aa)
	A0A484D7I8	Uncharacterized protein. (868 aa)
	A0A484D6J8	WD_REPEATS_REGION domain-containing protein. (554 aa)
	A0A484D5L1	Dimer_Tnp_hAT domain-containing protein. (797 aa)
	A0A484D4W1	Uncharacterized protein. (1886 aa)
	A0A484D446	Uncharacterized protein. (1391 aa)
	A0A484D201	BED-type domain-containing protein. (235 aa)
	A0A484D1N6	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (836 aa)
	A0A484D1E6	Uncharacterized protein. (1992 aa)
	A0A484D113	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A0A484D0F6	TPR_MLP1_2 domain-containing protein. (2356 aa)
	A0A484CVU3	Uncharacterized protein. (3187 aa)
	A0A484CVQ6	Small ubiquitin-related modifier. (95 aa)
	A0A484CVC8	Nsp1_C domain-containing protein. (569 aa)
	A0A484CUD3	TPR_MLP1_2 domain-containing protein. (2503 aa)
	A0A484CTF8	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (90 aa)
	A0A484CSF5	C3H1-type domain-containing protein. (438 aa)
	A0A484CS89	Uncharacterized protein. (1494 aa)
	A0A484CS52	RRM Nup35-type domain-containing protein. (267 aa)
	A0A484CRC9	RING-type domain-containing protein. (391 aa)
	A0A484CQT4	Uncharacterized protein. (669 aa)
	A0A484CNB9	IRK_C domain-containing protein. (1279 aa)
	A0A484CN58	Peptidase S59 domain-containing protein. (1858 aa)
	A0A484CMZ5	VEFS-Box domain-containing protein. (762 aa)
	A0A484CLJ7	BED-type domain-containing protein. (637 aa)
	A0A484CK40	Uncharacterized protein. (916 aa)
	A0A484CK39	BED-type domain-containing protein. (619 aa)
	A0A484CJW5	Uncharacterized protein. (896 aa)
	A0A484CJD0	RING-type domain-containing protein. (396 aa)
	A0A484CHI0	Small ubiquitin-related modifier. (95 aa)
	A0A484CGE8	Chromo domain-containing protein. (549 aa)
	A0A484CFP5	Chromo domain-containing protein. (361 aa)
	A0A484CFI3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
	A0A484CF30	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	A0A484CEA2	Uncharacterized protein. (1504 aa)
	A0A484CE35	Uncharacterized protein. (1363 aa)
	A0A484CDV3	Uncharacterized protein. (948 aa)
	A0A484CDN1	Uncharacterized protein. (566 aa)
	A0A484CA87	Uncharacterized protein. (99 aa)
	A0A484C753	Uncharacterized protein. (1195 aa)
	A0A484C600	Small ubiquitin-related modifier. (94 aa)
	A0A484C3I2	Small ubiquitin-related modifier. (101 aa)
	A0A484C2Z3	BED-type domain-containing protein. (681 aa)
	A0A484C2E9	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (214 aa)
	A0A484C1L0	BTB domain-containing protein. (288 aa)
	A0A484C0W8	Uncharacterized protein. (109 aa)
	A0A484C0V8	Dimer_Tnp_hAT domain-containing protein. (195 aa)
	A0A484C0T3	Uncharacterized protein. (637 aa)
	A0A484C0D0	Uncharacterized protein. (599 aa)
	A0A484BZ22	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
	A0A484BYW0	RanBD1 domain-containing protein. (520 aa)

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYD9	A0A484C1L0	DNA-binding protein SATB.	BTB domain-containing protein.	0.689
A0A484BYD9	A0A484C2E9	DNA-binding protein SATB.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.722
A0A484BYD9	A0A484C3I2	DNA-binding protein SATB.	Small ubiquitin-related modifier.	0.689
A0A484BYD9	A0A484C600	DNA-binding protein SATB.	Small ubiquitin-related modifier.	0.654
A0A484BYD9	A0A484CF30	DNA-binding protein SATB.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.722
A0A484BYD9	A0A484CHI0	DNA-binding protein SATB.	Small ubiquitin-related modifier.	0.654
A0A484BYD9	A0A484CVQ6	DNA-binding protein SATB.	Small ubiquitin-related modifier.	0.654
A0A484BYD9	A0A484DKU9	DNA-binding protein SATB.	Small ubiquitin-related modifier.	0.654
A0A484BYW0	A0A484BZ22	RanBD1 domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.933
A0A484BYW0	A0A484C0D0	RanBD1 domain-containing protein.	Uncharacterized protein.	0.844
A0A484BYW0	A0A484C1L0	RanBD1 domain-containing protein.	BTB domain-containing protein.	0.643
A0A484BYW0	A0A484C2E9	RanBD1 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.658
A0A484BYW0	A0A484C3I2	RanBD1 domain-containing protein.	Small ubiquitin-related modifier.	0.656
A0A484BYW0	A0A484C600	RanBD1 domain-containing protein.	Small ubiquitin-related modifier.	0.613
A0A484BYW0	A0A484CDN1	RanBD1 domain-containing protein.	Uncharacterized protein.	0.853
A0A484BYW0	A0A484CE35	RanBD1 domain-containing protein.	Uncharacterized protein.	0.992
A0A484BYW0	A0A484CEA2	RanBD1 domain-containing protein.	Uncharacterized protein.	0.937
A0A484BYW0	A0A484CF30	RanBD1 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.658
A0A484BYW0	A0A484CFI3	RanBD1 domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.994
A0A484BYW0	A0A484CHI0	RanBD1 domain-containing protein.	Small ubiquitin-related modifier.	0.613