STRINGSTRING
cwf19l2 cwf19l2 LOC115582583 LOC115582583 aggf1 aggf1 ppih ppih sde2 sde2 txnl4b txnl4b LOC115579636 LOC115579636 cwc25 cwc25 ENSSAUP00010002672 ENSSAUP00010002672 sf3b4 sf3b4 ENSSAUP00010003248 ENSSAUP00010003248 ik ik SRRM3 SRRM3 WDR25 WDR25 snrpg snrpg ppil4 ppil4 nsrp1 nsrp1 phf5a phf5a ppp1r10 ppp1r10 mfap1 mfap1 LOC115578763 LOC115578763 snrnp40 snrnp40 ppil2 ppil2 UBL5 UBL5 ENSSAUP00010010826 ENSSAUP00010010826 SMU1 SMU1 LOC115573795 LOC115573795 ENSSAUP00010011237 ENSSAUP00010011237 LOC115591207 LOC115591207 ENSSAUP00010011292 ENSSAUP00010011292 ENSSAUP00010011329 ENSSAUP00010011329 ENSSAUP00010011349 ENSSAUP00010011349 ENSSAUP00010011358 ENSSAUP00010011358 slu7 slu7 snrpd1 snrpd1 LOC115576891 LOC115576891 NCBP1 NCBP1 rnpc3 rnpc3 txnl4a txnl4a ENSSAUP00010014161 ENSSAUP00010014161 ENSSAUP00010014167 ENSSAUP00010014167 sf3a1 sf3a1 LOC115571274 LOC115571274 lsm2 lsm2 ENSSAUP00010016591 ENSSAUP00010016591 snrpd3 snrpd3 lsm6 lsm6 LOC115580063 LOC115580063 GPR149 GPR149 ENSSAUP00010018454 ENSSAUP00010018454 usp39 usp39 luc7l3 luc7l3 smndc1 smndc1 aqr aqr dhx29 dhx29 snrpd2 snrpd2 LOC115584185 LOC115584185 wbp4 wbp4 snrpe snrpe c8hxorf56 c8hxorf56 dhx36 dhx36 LOC115584179 LOC115584179 lsm4 lsm4 rbm41 rbm41 LOC115566298 LOC115566298 yju2 yju2 sf3b2 sf3b2 ENSSAUP00010023426 ENSSAUP00010023426 ENSSAUP00010023800 ENSSAUP00010023800 cwc15 cwc15 sf3b3 sf3b3 sf1 sf1 bud13 bud13 LOC115594409 LOC115594409 LOC115565806 LOC115565806 snw1 snw1 DDX41 DDX41 wdr53 wdr53 prkrip1 prkrip1 trnau1ap trnau1ap sf3b6 sf3b6 fam32a fam32a dhx16 dhx16 TCERG1 TCERG1 cdc5l cdc5l YTHDC2 YTHDC2 ZNF830 ZNF830 bcas2 bcas2 ENSSAUP00010029264 ENSSAUP00010029264 ddx23 ddx23 lsm1 lsm1 ENSSAUP00010030319 ENSSAUP00010030319 LOC115572665 LOC115572665 ENSSAUP00010030712 ENSSAUP00010030712 dhx40 dhx40 ENSSAUP00010031032 ENSSAUP00010031032 snrpa snrpa ENSSAUP00010031272 ENSSAUP00010031272 gpkow gpkow sf3a3 sf3a3 eftud2 eftud2 luc7l luc7l crnkl1 crnkl1 ccdc12 ccdc12 lsm8 lsm8 ppie ppie snip1 snip1 bud31 bud31 parpbp parpbp srrm1 srrm1 DHX15 DHX15 syf2 syf2 u2surp u2surp dhx35 dhx35 prpf6 prpf6 dhx57 dhx57 rbm22 rbm22 prpf3 prpf3 cwc27 cwc27 ENSSAUP00010040404 ENSSAUP00010040404 gpatch2 gpatch2 SUGP1 SUGP1 LOC115584527 LOC115584527 sf3a2 sf3a2 prpf19 prpf19 ENSSAUP00010043211 ENSSAUP00010043211 ENSSAUP00010043388 ENSSAUP00010043388 cactin cactin lrmda lrmda cdc40 cdc40 sart3 sart3 ENSSAUP00010045789 ENSSAUP00010045789 rbm17 rbm17 LOC115582992 LOC115582992 xab2 xab2 plrg1 plrg1 rbm39 rbm39 prpf31 prpf31 leng1 leng1 spaca6 spaca6 LOC115575525 LOC115575525 prpf8 prpf8 zmat5 zmat5 daw1 daw1 ppil1 ppil1 dhx34 dhx34 LOC115571759 LOC115571759 rbm5 rbm5 ppil3 ppil3 dhx38 dhx38 cwc22 cwc22 ENSSAUP00010053257 ENSSAUP00010053257 snrnp27 snrnp27 snrnp200 snrnp200 WDR70 WDR70 prpf4b prpf4b LOC115574442 LOC115574442 dhx30 dhx30 ddx46 ddx46 prpf18 prpf18 sart1 sart1 ENSSAUP00010060753 ENSSAUP00010060753 ddx42 ddx42 ENSSAUP00010061454 ENSSAUP00010061454 sf3b1 sf3b1 ENSSAUP00010062906 ENSSAUP00010062906 ENSSAUP00010063450 ENSSAUP00010063450 ENSSAUP00010063502 ENSSAUP00010063502 ENSSAUP00010063646 ENSSAUP00010063646 LOC115594059 LOC115594059 ALYREF ALYREF ENSSAUP00010064772 ENSSAUP00010064772 prpf39 prpf39 ncbp2 ncbp2 snrpc snrpc sf3b5 sf3b5 LOC115590162 LOC115590162 lsm7 lsm7 prpf40a prpf40a ENSSAUP00010068851 ENSSAUP00010068851 ddx59 ddx59
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cwf19l2CWF19 like cell cycle control factor 2. (991 aa)
LOC115582583U6 snRNA-associated Sm-like protein LSm3. (110 aa)
aggf1Angiogenic factor with G-patch and FHA domains 1. (747 aa)
ppihPeptidylprolyl isomerase H. (179 aa)
sde2SDE2 telomere maintenance homolog. (466 aa)
txnl4bThioredoxin like 4B. (149 aa)
LOC115579636Peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like. (1172 aa)
cwc25CWC25 spliceosome associated protein homolog. (401 aa)
ENSSAUP00010002672annotation not available (364 aa)
sf3b4Splicing factor 3b subunit 4. (398 aa)
ENSSAUP00010003248Zinc finger, matrin-type 2. (205 aa)
ikIK cytokine. (539 aa)
SRRM3Serine/arginine repetitive matrix 3. (647 aa)
WDR25WD repeat domain 25. (534 aa)
snrpgSmall nuclear ribonucleoprotein polypeptide G. (101 aa)
ppil4Peptidylprolyl isomerase like 4. (492 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (518 aa)
phf5aPHD finger protein 5A. (133 aa)
ppp1r10Protein phosphatase 1 regulatory subunit 10. (810 aa)
mfap1Microfibril associated protein 1. (441 aa)
LOC115578763Nucleolar protein of 40 kDa-like. (248 aa)
snrnp40Small nuclear ribonucleoprotein U5 subunit 40. (364 aa)
ppil2Peptidylprolyl isomerase like 2. (525 aa)
UBL5Ubiquitin like 5. (73 aa)
ENSSAUP00010010826DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (738 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
LOC115573795RNA-binding protein 25-like. (811 aa)
ENSSAUP00010011237Small nuclear ribonucleoprotein polypeptide A. (293 aa)
LOC115591207Transmembrane 6 superfamily member 1-like. (381 aa)
ENSSAUP00010011292annotation not available (182 aa)
ENSSAUP00010011329annotation not available (196 aa)
ENSSAUP00010011349annotation not available (193 aa)
ENSSAUP00010011358annotation not available (198 aa)
slu7SLU7 homolog, splicing factor. (581 aa)
snrpd1Small nuclear ribonucleoprotein D1 polypeptide. (136 aa)
LOC115576891Protein SON-like. (981 aa)
NCBP1Nuclear cap binding protein subunit 1. (795 aa)
rnpc3RNA binding region (RNP1, RRM) containing 3. (505 aa)
txnl4aThioredoxin like 4A. (142 aa)
ENSSAUP00010014161annotation not available (134 aa)
ENSSAUP00010014167annotation not available (177 aa)
sf3a1Splicing factor 3a subunit 1. (783 aa)
LOC115571274Leucine-rich repeat-containing protein 51-like. (205 aa)
lsm2LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated. (108 aa)
ENSSAUP00010016591RNA binding motif protein 10. (664 aa)
snrpd3Small nuclear ribonucleoprotein D3 polypeptide. (127 aa)
lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (111 aa)
LOC115580063GC-rich sequence DNA-binding factor 2-like. (880 aa)
GPR149G protein-coupled receptor 149. (771 aa)
ENSSAUP00010018454Calcium homeostasis endoplasmic reticulum protein. (1040 aa)
usp39Ubiquitin specific peptidase 39. (501 aa)
luc7l3LUC7 like 3 pre-mRNA splicing factor. (474 aa)
smndc1Survival motor neuron domain containing 1. (236 aa)
aqrAquarius intron-binding spliceosomal factor. (1468 aa)
dhx29DExH-box helicase 29. (1386 aa)
snrpd2Small nuclear ribonucleoprotein D2 polypeptide. (150 aa)
LOC115584185pre-mRNA-splicing factor ISY1 homolog. (284 aa)
wbp4WW domain binding protein 4. (425 aa)
snrpeSmall nuclear ribonucleoprotein polypeptide E. (92 aa)
c8hxorf56Chromosome 8 CXorf56 homolog. (225 aa)
dhx36DEAH-box helicase 36. (1076 aa)
LOC115584179RNA-binding protein 39-like. (539 aa)
lsm4LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated. (153 aa)
rbm41RNA binding motif protein 41. (439 aa)
LOC115566298SH2 domain-containing adapter protein F-like. (418 aa)
yju2YJU2 splicing factor homolog. (344 aa)
sf3b2Splicing factor 3b subunit 2. (883 aa)
ENSSAUP00010023426annotation not available (867 aa)
ENSSAUP00010023800annotation not available (87 aa)
cwc15CWC15 spliceosome associated protein homolog. (240 aa)
sf3b3Splicing factor 3b subunit 3. (1217 aa)
sf1Splicing factor 1. (678 aa)
bud13BUD13 homolog. (526 aa)
LOC115594409U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like. (250 aa)
LOC115565806Leucine-rich repeat-containing protein 51-like. (180 aa)
snw1SNW domain containing 1. (603 aa)
DDX41DEAD-box helicase 41. (630 aa)
wdr53WD repeat domain 53. (387 aa)
prkrip1PRKR interacting protein 1. (188 aa)
trnau1aptRNA selenocysteine 1 associated protein 1. (309 aa)
sf3b6Splicing factor 3b subunit 6. (125 aa)
fam32aFamily with sequence similarity 32 member A. (113 aa)
dhx16DEAH-box helicase 16. (1054 aa)
TCERG1HIV-1 Tat specific factor 1. (990 aa)
cdc5lCell division cycle 5 like. (812 aa)
YTHDC2YTH domain containing 2. (1399 aa)
ZNF830Zinc finger protein 830. (346 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
ENSSAUP00010029264pre-mRNA processing factor 38A. (334 aa)
ddx23DEAD-box helicase 23. (806 aa)
lsm1LSM1 homolog, mRNA degradation associated. (133 aa)
ENSSAUP00010030319Small nuclear ribonucleoprotein polypeptide B2. (223 aa)
LOC115572665tRNA selenocysteine 1-associated protein 1-like. (338 aa)
ENSSAUP00010030712annotation not available (774 aa)
dhx40DEAH-box helicase 40. (793 aa)
ENSSAUP00010031032Tuftelin interacting protein 11. (838 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (283 aa)
ENSSAUP00010031272Polyglutamine binding protein 1. (251 aa)
gpkowG-patch domain and KOW motifs. (515 aa)
sf3a3Splicing factor 3a subunit 3. (501 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
luc7lLUC7 like. (362 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (863 aa)
ccdc12Coiled-coil domain containing 12. (175 aa)
lsm8LSM8 homolog, U6 small nuclear RNA associated. (96 aa)
ppiePeptidylprolyl isomerase E. (302 aa)
snip1Smad nuclear interacting protein 1. (363 aa)
bud31BUD31 homolog. (144 aa)
parpbpPARP1 binding protein. (592 aa)
srrm1Serine and arginine repetitive matrix 1. (872 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (762 aa)
syf2SYF2 pre-mRNA splicing factor. (252 aa)
u2surpU2 snRNP associated SURP domain containing. (986 aa)
dhx35DEAH-box helicase 35. (699 aa)
prpf6pre-mRNA processing factor 6. (969 aa)
dhx57DExH-box helicase 57. (1471 aa)
rbm22RNA binding motif protein 22. (427 aa)
prpf3pre-mRNA processing factor 3. (702 aa)
cwc27CWC27 spliceosome associated cyclophilin. (481 aa)
ENSSAUP00010040404Peptidylprolyl isomerase domain and WD repeat containing 1. (648 aa)
gpatch2G-patch domain containing 2. (530 aa)
SUGP1SURP and G-patch domain containing 1. (638 aa)
LOC115584527WD40 repeat-containing protein SMU1-like. (510 aa)
sf3a2Splicing factor 3a subunit 2. (297 aa)
prpf19pre-mRNA processing factor 19. (505 aa)
ENSSAUP00010043211Small nuclear ribonucleoprotein polypeptide F. (95 aa)
ENSSAUP00010043388annotation not available (421 aa)
cactinCactin, spliceosome C complex subunit. (861 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
cdc40Cell division cycle 40. (585 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (950 aa)
ENSSAUP00010045789annotation not available (424 aa)
rbm17RNA binding motif protein 17. (427 aa)
LOC115582992RNA-binding protein 6-like. (1326 aa)
xab2XPA binding protein 2. (855 aa)
plrg1Pleiotropic regulator 1. (510 aa)
rbm39RNA binding motif protein 39. (500 aa)
prpf31pre-mRNA processing factor 31. (508 aa)
leng1Leukocyte receptor cluster member 1. (282 aa)
spaca6Sperm acrosome associated 6. (334 aa)
LOC115575525Serine/arginine repetitive matrix protein 2-like. (1462 aa)
prpf8pre-mRNA processing factor 8. (2338 aa)
zmat5Zinc finger matrin-type 5. (248 aa)
daw1Dynein assembly factor with WD repeats 1. (419 aa)
ppil1Peptidylprolyl isomerase like 1. (166 aa)
dhx34DExH-box helicase 34. (1151 aa)
LOC115571759ATP-dependent RNA helicase DHX8. (1221 aa)
rbm5RNA binding motif protein 5. (843 aa)
ppil3Peptidylprolyl isomerase like 3. (182 aa)
dhx38DEAH-box helicase 38. (1261 aa)
cwc22CWC22 spliceosome associated protein homolog. (1077 aa)
ENSSAUP00010053257annotation not available (578 aa)
snrnp27Small nuclear ribonucleoprotein U4/U6.U5 subunit 27. (160 aa)
snrnp200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
WDR70WD repeat domain 70. (652 aa)
prpf4bpre-mRNA processing factor 4B. (1023 aa)
LOC115574442Interleukin-31 receptor subunit alpha-like. (786 aa)
dhx30DExH-box helicase 30. (1167 aa)
ddx46DEAD-box helicase 46. (1151 aa)
prpf18pre-mRNA processing factor 18. (394 aa)
sart1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (783 aa)
ENSSAUP00010060753LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated. (107 aa)
ddx42DEAD-box helicase 42. (908 aa)
ENSSAUP00010061454Ring finger protein 113A. (323 aa)
sf3b1Splicing factor 3b subunit 1. (1314 aa)
ENSSAUP00010062906Zgc:158803. (289 aa)
ENSSAUP00010063450RNA binding motif protein 25a. (762 aa)
ENSSAUP00010063502WW domain containing adaptor with coiled-coil a. (594 aa)
ENSSAUP00010063646Catenin, beta like 1. (576 aa)
LOC115594059U2 snRNP-associated SURP motif-containing protein-like. (924 aa)
ALYREFAly/REF export factor. (272 aa)
ENSSAUP00010064772Cell division cycle and apoptosis regulator 1. (1179 aa)
prpf39pre-mRNA processing factor 39. (795 aa)
ncbp2Nuclear cap binding protein subunit 2. (164 aa)
snrpcSmall nuclear ribonucleoprotein polypeptide C. (171 aa)
sf3b5Splicing factor 3b subunit 5. (86 aa)
LOC115590162pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like. (763 aa)
lsm7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
prpf40apre-mRNA processing factor 40 homolog A. (900 aa)
ENSSAUP00010068851Zinc finger CCHC-type and RNA binding motif 1. (221 aa)
ddx59DEAD-box helicase 59. (656 aa)
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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