(17 nodes) Importin-beta N-terminal domain, and snRNA import into nucleus network (Sparus aurata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ipo11	Importin 11. (975 aa)
	adgrd1	Adhesion G protein-coupled receptor D1. (918 aa)
	ENSSAUP00010004581	Adhesion G protein-coupled receptor B2. (1638 aa)
	tnpo3	Transportin 3. (979 aa)
	ipo5	Importin 5. (1099 aa)
	ENSSAUP00010022102	RAN, member RAS oncogene family. (232 aa)
	snupn	Snurportin 1. (374 aa)
	LOC115568161	Adhesion G protein-coupled receptor B1-like. (1590 aa)
	ENSSAUP00010026756	Exportin 1 (CRM1 homolog, yeast) b. (1079 aa)
	ipo4	Importin 4. (1108 aa)
	tnpo1	Transportin 1. (918 aa)
	ENSSAUP00010032541	Si:ch73-182a11.2. (972 aa)
	kpnb1	Karyopherin subunit beta 1. (1109 aa)
	xpo6	Exportin 6. (1152 aa)
	xpot	Exportin for tRNA. (971 aa)
	adgrb3	Adhesion G protein-coupled receptor B3. (1535 aa)
	ENSSAUP00010064068	Exportin 5. (1310 aa)

Your Current Organism:

Sparus aurata

NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSAUP00010004581	ENSSAUP00010026756	ENSSAUP00010004581	ENSSAUP00010026756	Adhesion G protein-coupled receptor B2.	Exportin 1 (CRM1 homolog, yeast) b.	0.810
ENSSAUP00010004581	ENSSAUP00010032541	ENSSAUP00010004581	ENSSAUP00010032541	Adhesion G protein-coupled receptor B2.	Si:ch73-182a11.2.	0.682
ENSSAUP00010004581	ENSSAUP00010064068	ENSSAUP00010004581	ENSSAUP00010064068	Adhesion G protein-coupled receptor B2.	Exportin 5.	0.810
ENSSAUP00010004581	ipo11	ENSSAUP00010004581	ENSSAUP00010000702	Adhesion G protein-coupled receptor B2.	Importin 11.	0.596
ENSSAUP00010004581	ipo4	ENSSAUP00010004581	ENSSAUP00010027149	Adhesion G protein-coupled receptor B2.	Importin 4.	0.743
ENSSAUP00010004581	ipo5	ENSSAUP00010004581	ENSSAUP00010013695	Adhesion G protein-coupled receptor B2.	Importin 5.	0.743
ENSSAUP00010004581	kpnb1	ENSSAUP00010004581	ENSSAUP00010033407	Adhesion G protein-coupled receptor B2.	Karyopherin subunit beta 1.	0.935
ENSSAUP00010004581	snupn	ENSSAUP00010004581	ENSSAUP00010022245	Adhesion G protein-coupled receptor B2.	Snurportin 1.	0.718
ENSSAUP00010004581	tnpo1	ENSSAUP00010004581	ENSSAUP00010030271	Adhesion G protein-coupled receptor B2.	Transportin 1.	0.811
ENSSAUP00010004581	tnpo3	ENSSAUP00010004581	ENSSAUP00010011923	Adhesion G protein-coupled receptor B2.	Transportin 3.	0.748
ENSSAUP00010004581	xpo6	ENSSAUP00010004581	ENSSAUP00010037910	Adhesion G protein-coupled receptor B2.	Exportin 6.	0.810
ENSSAUP00010004581	xpot	ENSSAUP00010004581	ENSSAUP00010040091	Adhesion G protein-coupled receptor B2.	Exportin for tRNA.	0.932
ENSSAUP00010022102	ENSSAUP00010026756	ENSSAUP00010022102	ENSSAUP00010026756	RAN, member RAS oncogene family.	Exportin 1 (CRM1 homolog, yeast) b.	0.983
ENSSAUP00010022102	ENSSAUP00010032541	ENSSAUP00010022102	ENSSAUP00010032541	RAN, member RAS oncogene family.	Si:ch73-182a11.2.	0.858
ENSSAUP00010022102	ENSSAUP00010064068	ENSSAUP00010022102	ENSSAUP00010064068	RAN, member RAS oncogene family.	Exportin 5.	0.990
ENSSAUP00010022102	ipo11	ENSSAUP00010022102	ENSSAUP00010000702	RAN, member RAS oncogene family.	Importin 11.	0.727
ENSSAUP00010022102	ipo4	ENSSAUP00010022102	ENSSAUP00010027149	RAN, member RAS oncogene family.	Importin 4.	0.928
ENSSAUP00010022102	ipo5	ENSSAUP00010022102	ENSSAUP00010013695	RAN, member RAS oncogene family.	Importin 5.	0.939
ENSSAUP00010022102	kpnb1	ENSSAUP00010022102	ENSSAUP00010033407	RAN, member RAS oncogene family.	Karyopherin subunit beta 1.	0.983
ENSSAUP00010022102	snupn	ENSSAUP00010022102	ENSSAUP00010022245	RAN, member RAS oncogene family.	Snurportin 1.	0.880