(37 nodes) Glycosphingolipid biosynthesis - globo and isoglobo series network (Sparus aurata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	ENSSAUP00010029550	annotation not available (343 aa)
	A3GALT2	Alpha 1,3-galactosyltransferase 2. (337 aa)
	rasip1	Ras interacting protein 1. (1001 aa)
	ENSSAUP00010038425	Rab geranylgeranyltransferase subunit beta. (370 aa)
	LOC115575495	Ras-associating and dilute domain-containing protein-like. (1177 aa)
	LOC115574648	alpha-N-acetylgalactosaminidase-like. (435 aa)
	st8sia1	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1. (335 aa)
	fam149b1	Family with sequence similarity 149 member B1. (680 aa)
	LOC115582967	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like. (382 aa)
	LOC115579869	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (375 aa)
	LOC115580158	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (376 aa)
	GBGT1	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (357 aa)
	gla	Galactosidase alpha. (432 aa)
	LOC115578387	Alpha-(1,3)-fucosyltransferase 9-like. (359 aa)
	ENSSAUP00010000453	annotation not available (370 aa)
	LOC115578453	Alpha-(1,3)-fucosyltransferase 9-like. (360 aa)
	LOC115578482	Alpha-(1,3)-fucosyltransferase 9-like. (361 aa)
	LOC115578407	Alpha-(1,3)-fucosyltransferase 9-like. (352 aa)
	LOC115567015	alpha-N-acetylgalactosaminidase-like. (436 aa)
	ENSSAUP00010007787	annotation not available (291 aa)
	ENSSAUP00010008124	Ras association and DIL domains. (1106 aa)
	ENSSAUP00010008328	annotation not available (316 aa)
	ST3GAL1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1. (334 aa)
	ENSSAUP00010015625	annotation not available (388 aa)
	ENSSAUP00010017485	Fucosyltransferase 9a. (366 aa)
	ENSSAUP00010021224	Hexosaminidase A (alpha polypeptide). (571 aa)
	ENSSAUP00010021757	annotation not available (325 aa)
	ENSSAUP00010024212	ST3 beta-galactoside alpha-2,3-sialyltransferase 2. (374 aa)
	ENSSAUP00010026194	Si:ch211-176g6.2. (816 aa)
	ENSSAUP00010028239	annotation not available (372 aa)
	ENSSAUP00010028246	annotation not available (361 aa)
	LOC115595610	Alpha-(1,3)-fucosyltransferase 9-like. (381 aa)
	ENSSAUP00010028251	annotation not available (351 aa)
	LOC115595612	Alpha-(1,3)-fucosyltransferase 9-like. (380 aa)
	LOC115595611	Alpha-(1,3)-fucosyltransferase 9-like. (381 aa)
	LOC115578614	Alpha-(1,3)-fucosyltransferase 9-like. (424 aa)
	hexb	Hexosaminidase subunit beta. (556 aa)

Your Current Organism:

Sparus aurata

NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A3GALT2	ENSSAUP00010008124	ENSSAUP00010034134	ENSSAUP00010008124	Alpha 1,3-galactosyltransferase 2.	Ras association and DIL domains.	0.561
A3GALT2	ENSSAUP00010008328	ENSSAUP00010034134	ENSSAUP00010008328	Alpha 1,3-galactosyltransferase 2.	annotation not available	0.846
A3GALT2	ENSSAUP00010021757	ENSSAUP00010034134	ENSSAUP00010021757	Alpha 1,3-galactosyltransferase 2.	annotation not available	0.805
A3GALT2	ENSSAUP00010024212	ENSSAUP00010034134	ENSSAUP00010024212	Alpha 1,3-galactosyltransferase 2.	ST3 beta-galactoside alpha-2,3-sialyltransferase 2.	0.508
A3GALT2	ENSSAUP00010026194	ENSSAUP00010034134	ENSSAUP00010026194	Alpha 1,3-galactosyltransferase 2.	Si:ch211-176g6.2.	0.561
A3GALT2	GBGT1	ENSSAUP00010034134	ENSSAUP00010051226	Alpha 1,3-galactosyltransferase 2.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	0.851
A3GALT2	LOC115575495	ENSSAUP00010034134	ENSSAUP00010041967	Alpha 1,3-galactosyltransferase 2.	Ras-associating and dilute domain-containing protein-like.	0.561
A3GALT2	LOC115579869	ENSSAUP00010034134	ENSSAUP00010058647	Alpha 1,3-galactosyltransferase 2.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	0.797
A3GALT2	LOC115580158	ENSSAUP00010034134	ENSSAUP00010058631	Alpha 1,3-galactosyltransferase 2.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.	0.798
A3GALT2	LOC115582967	ENSSAUP00010034134	ENSSAUP00010062585	Alpha 1,3-galactosyltransferase 2.	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like.	0.508
A3GALT2	ST3GAL1	ENSSAUP00010034134	ENSSAUP00010015619	Alpha 1,3-galactosyltransferase 2.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1.	0.508
A3GALT2	rasip1	ENSSAUP00010034134	ENSSAUP00010035052	Alpha 1,3-galactosyltransferase 2.	Ras interacting protein 1.	0.561
A3GALT2	st8sia1	ENSSAUP00010034134	ENSSAUP00010069053	Alpha 1,3-galactosyltransferase 2.	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1.	0.533
ENSSAUP00010000453	ENSSAUP00010008328	ENSSAUP00010000453	ENSSAUP00010008328	annotation not available	annotation not available	0.507
ENSSAUP00010000453	ENSSAUP00010017485	ENSSAUP00010000453	ENSSAUP00010017485	annotation not available	Fucosyltransferase 9a.	0.452
ENSSAUP00010000453	ENSSAUP00010021224	ENSSAUP00010000453	ENSSAUP00010021224	annotation not available	Hexosaminidase A (alpha polypeptide).	0.554
ENSSAUP00010000453	ENSSAUP00010028239	ENSSAUP00010000453	ENSSAUP00010028239	annotation not available	annotation not available	0.462
ENSSAUP00010000453	ENSSAUP00010028246	ENSSAUP00010000453	ENSSAUP00010028246	annotation not available	annotation not available	0.460
ENSSAUP00010000453	ENSSAUP00010028251	ENSSAUP00010000453	ENSSAUP00010028251	annotation not available	annotation not available	0.461
ENSSAUP00010000453	LOC115595610	ENSSAUP00010000453	ENSSAUP00010028249	annotation not available	Alpha-(1,3)-fucosyltransferase 9-like.	0.461