44 items (Monosiga brevicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A9UTW7_MONBE	Predicted protein. (260 aa)
	A9UUX8_MONBE	Predicted protein. (521 aa)
	A9UVK7_MONBE	Predicted protein. (8879 aa)
	A9UVZ1_MONBE	Predicted protein. (138 aa)
	A9UX35_MONBE	Predicted protein. (1197 aa)
	A9UXA0_MONBE	Predicted protein. (847 aa)
	A9UZ90_MONBE	Predicted protein. (578 aa)
	Mbre_bop1	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (799 aa)
	A9V561_MONBE	Predicted protein. (815 aa)
	A9V0V0_MONBE	Predicted protein. (303 aa)
	A9V1E9_MONBE	Predicted protein. (855 aa)
	A9V274_MONBE	Predicted protein. (664 aa)
	A9V414_MONBE	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (252 aa)
	A9V452_MONBE	Predicted protein. (145 aa)
	A9VD13_MONBE	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	A9VB08_MONBE	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (568 aa)
	A9VAI1_MONBE	Predicted protein. (537 aa)
	A9VAB1_MONBE	Predicted protein. (542 aa)
	A9VA64_MONBE	Predicted protein. (291 aa)
	A9VA30_MONBE	Predicted protein. (496 aa)
	A9V926_MONBE	Predicted protein. (666 aa)
	A9V8N9_MONBE	Predicted protein. (658 aa)
	A9UNK1_MONBE	Uncharacterized protein. (862 aa)
	A9V7X8_MONBE	Predicted protein. (2820 aa)
	A9V611_MONBE	Predicted protein. (1010 aa)
	A9V5W0_MONBE	Predicted protein. (459 aa)
	A9V5H0_MONBE	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (1021 aa)
	A9V580_MONBE	Predicted protein. (285 aa)
	A9UXN7_MONBE	Predicted protein. (4223 aa)
	A9UZ71_MONBE	Predicted protein. (2341 aa)
	bysl	Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits; Belongs to the bystin family. (414 aa)
	A9UP20_MONBE	Brix domain-containing protein. (286 aa)
	A9UP73_MONBE	Uncharacterized protein. (436 aa)
	A9UPJ4_MONBE	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (216 aa)
	A9UQ08_MONBE	Uncharacterized protein. (384 aa)
	A9UQX8_MONBE	Uncharacterized protein. (816 aa)
	PESC_MONBE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (589 aa)
	A9US62_MONBE	Predicted protein. (563 aa)
	A9USV6_MONBE	Predicted protein. (432 aa)
	A9USY7_MONBE	Predicted protein. (697 aa)
	A9USZ3_MONBE	Predicted protein; Belongs to the protein kinase superfamily. (310 aa)
	A9UTB8_MONBE	Predicted protein. (163 aa)
	A9UTI6_MONBE	Predicted protein. (408 aa)
	A9UTR2_MONBE	Predicted protein. (793 aa)

Your Current Organism:

Monosiga brevicollis

NCBI taxonomy Id: 81824
Other names: M. brevicollis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A9UNK1_MONBE	A9UP20_MONBE	A9UNK1	A9UP20	Uncharacterized protein.	Brix domain-containing protein.	0.982
A9UNK1_MONBE	A9UP73_MONBE	A9UNK1	A9UP73	Uncharacterized protein.	Uncharacterized protein.	0.998
A9UNK1_MONBE	A9UPJ4_MONBE	A9UNK1	A9UPJ4	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.510
A9UNK1_MONBE	A9UQ08_MONBE	A9UNK1	A9UQ08	Uncharacterized protein.	Uncharacterized protein.	0.919
A9UNK1_MONBE	A9UQX8_MONBE	A9UNK1	A9UQX8	Uncharacterized protein.	Uncharacterized protein.	0.986
A9UNK1_MONBE	A9US62_MONBE	A9UNK1	A9US62	Uncharacterized protein.	Predicted protein.	0.944
A9UNK1_MONBE	A9USV6_MONBE	A9UNK1	A9USV6	Uncharacterized protein.	Predicted protein.	0.732
A9UNK1_MONBE	A9USY7_MONBE	A9UNK1	A9USY7	Uncharacterized protein.	Predicted protein.	0.734
A9UNK1_MONBE	A9UTB8_MONBE	A9UNK1	A9UTB8	Uncharacterized protein.	Predicted protein.	0.819
A9UNK1_MONBE	A9UTI6_MONBE	A9UNK1	A9UTI6	Uncharacterized protein.	Predicted protein.	0.882
A9UNK1_MONBE	A9UTR2_MONBE	A9UNK1	A9UTR2	Uncharacterized protein.	Predicted protein.	0.939
A9UNK1_MONBE	A9UTW7_MONBE	A9UNK1	A9UTW7	Uncharacterized protein.	Predicted protein.	0.458
A9UNK1_MONBE	A9UUX8_MONBE	A9UNK1	A9UUX8	Uncharacterized protein.	Predicted protein.	0.991
A9UNK1_MONBE	A9UVK7_MONBE	A9UNK1	A9UVK7	Uncharacterized protein.	Predicted protein.	0.646
A9UNK1_MONBE	A9UVZ1_MONBE	A9UNK1	A9UVZ1	Uncharacterized protein.	Predicted protein.	0.981
A9UNK1_MONBE	A9UX35_MONBE	A9UNK1	A9UX35	Uncharacterized protein.	Predicted protein.	0.999
A9UNK1_MONBE	A9UXA0_MONBE	A9UNK1	A9UXA0	Uncharacterized protein.	Predicted protein.	0.998
A9UNK1_MONBE	A9UXN7_MONBE	A9UNK1	A9UXN7	Uncharacterized protein.	Predicted protein.	0.646
A9UNK1_MONBE	A9UZ71_MONBE	A9UNK1	A9UZ71	Uncharacterized protein.	Predicted protein.	0.788
A9UNK1_MONBE	A9UZ90_MONBE	A9UNK1	A9UZ90	Uncharacterized protein.	Predicted protein.	0.999