(17 nodes) NUDIX hydrolase-like domain superfamily network (Monosiga brevicollis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A9V8P6_MONBE	Predicted protein. (254 aa)
	A9VCG1_MONBE	Predicted protein. (374 aa)
	A9VBR4_MONBE	Predicted protein. (225 aa)
	A9UW63_MONBE	Predicted protein; Belongs to the Nudix hydrolase family. (191 aa)
	A9UX49_MONBE	Predicted protein. (144 aa)
	A9UXL1_MONBE	Predicted protein. (163 aa)
	A9UY32_MONBE	Predicted protein. (173 aa)
	A9V2X7_MONBE	Predicted protein. (1783 aa)
	A9V3B6_MONBE	Predicted protein. (2600 aa)
	A9V5A7_MONBE	Predicted protein. (1561 aa)
	A9VAN3_MONBE	Predicted protein. (344 aa)
	A9VAJ3_MONBE	Predicted protein. (1444 aa)
	A9V5X8_MONBE	Predicted protein. (688 aa)
	A9UPR6_MONBE	Nudix hydrolase domain-containing protein. (207 aa)
	A9UQX7_MONBE	Nudix hydrolase domain-containing protein. (382 aa)
	A9URE8_MONBE	Predicted protein. (233 aa)
	A9US48_MONBE	Predicted protein. (177 aa)

Your Current Organism:

Monosiga brevicollis

NCBI taxonomy Id: 81824
Other names: M. brevicollis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A9UPR6_MONBE	A9UX49_MONBE	A9UPR6	A9UX49	Nudix hydrolase domain-containing protein.	Predicted protein.	0.637
A9UPR6_MONBE	A9UXL1_MONBE	A9UPR6	A9UXL1	Nudix hydrolase domain-containing protein.	Predicted protein.	0.459
A9UPR6_MONBE	A9UY32_MONBE	A9UPR6	A9UY32	Nudix hydrolase domain-containing protein.	Predicted protein.	0.429
A9UPR6_MONBE	A9VAN3_MONBE	A9UPR6	A9VAN3	Nudix hydrolase domain-containing protein.	Predicted protein.	0.578
A9UW63_MONBE	A9UX49_MONBE	A9UW63	A9UX49	Predicted protein; Belongs to the Nudix hydrolase family.	Predicted protein.	0.497
A9UW63_MONBE	A9UXL1_MONBE	A9UW63	A9UXL1	Predicted protein; Belongs to the Nudix hydrolase family.	Predicted protein.	0.501
A9UW63_MONBE	A9UY32_MONBE	A9UW63	A9UY32	Predicted protein; Belongs to the Nudix hydrolase family.	Predicted protein.	0.497
A9UW63_MONBE	A9VAN3_MONBE	A9UW63	A9VAN3	Predicted protein; Belongs to the Nudix hydrolase family.	Predicted protein.	0.515
A9UX49_MONBE	A9UPR6_MONBE	A9UX49	A9UPR6	Predicted protein.	Nudix hydrolase domain-containing protein.	0.637
A9UX49_MONBE	A9UW63_MONBE	A9UX49	A9UW63	Predicted protein.	Predicted protein; Belongs to the Nudix hydrolase family.	0.497
A9UX49_MONBE	A9UXL1_MONBE	A9UX49	A9UXL1	Predicted protein.	Predicted protein.	0.670
A9UX49_MONBE	A9UY32_MONBE	A9UX49	A9UY32	Predicted protein.	Predicted protein.	0.663
A9UX49_MONBE	A9VAN3_MONBE	A9UX49	A9VAN3	Predicted protein.	Predicted protein.	0.558
A9UXL1_MONBE	A9UPR6_MONBE	A9UXL1	A9UPR6	Predicted protein.	Nudix hydrolase domain-containing protein.	0.459
A9UXL1_MONBE	A9UW63_MONBE	A9UXL1	A9UW63	Predicted protein.	Predicted protein; Belongs to the Nudix hydrolase family.	0.501
A9UXL1_MONBE	A9UX49_MONBE	A9UXL1	A9UX49	Predicted protein.	Predicted protein.	0.670
A9UXL1_MONBE	A9UY32_MONBE	A9UXL1	A9UY32	Predicted protein.	Predicted protein.	0.502
A9UXL1_MONBE	A9VAN3_MONBE	A9UXL1	A9VAN3	Predicted protein.	Predicted protein.	0.578
A9UY32_MONBE	A9UPR6_MONBE	A9UY32	A9UPR6	Predicted protein.	Nudix hydrolase domain-containing protein.	0.429
A9UY32_MONBE	A9UW63_MONBE	A9UY32	A9UW63	Predicted protein.	Predicted protein; Belongs to the Nudix hydrolase family.	0.497