STRINGSTRING
LOC108901984 LOC108901984 rem2 rem2 RAPGEF5 RAPGEF5 ENSLCAP00010036323 ENSLCAP00010036323 Rapgefl1 Rapgefl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108901984Uncharacterized protein. (536 aa)
rem2Uncharacterized protein. (309 aa)
RAPGEF5Rap guanine nucleotide exchange factor 5. (643 aa)
ENSLCAP00010036323Nucleolar protein 4-like a. (687 aa)
Rapgefl1Rap guanine nucleotide exchange factor (GEF)-like 1. (381 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.