17 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108903041	Hyaluronidase. (515 aa)
	Met	MET proto-oncogene, receptor tyrosine kinase. (1377 aa)
	ENSLCAP00010006452	Tensin 2b. (1245 aa)
	LOC108879648	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily. (716 aa)
	LOC108889968	Uncharacterized protein. (1377 aa)
	ENSLCAP00010019351	Uncharacterized protein. (1020 aa)
	cemip	G8 domain-containing protein. (1348 aa)
	TNS3	Uncharacterized protein. (1403 aa)
	LOC108882679	Uncharacterized protein. (1749 aa)
	itgbl1	Uncharacterized protein. (487 aa)
	mst1r	Uncharacterized protein. (1374 aa)
	ENSLCAP00010045441	Tensin 1. (1533 aa)
	TNS3-2	Tensin 3. (1053 aa)
	ENSLCAP00010047577	Tyrosine-protein kinase receptor. (619 aa)
	ENSLCAP00010048292	Tensin 1b. (1602 aa)
	ENSLCAP00010048968	Tyrosine-protein kinase receptor. (1485 aa)
	ENSLCAP00010051813	Uncharacterized protein. (162 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010006452	ENSLCAP00010047577	ENSLCAP00010006452	ENSLCAP00010047577	Tensin 2b.	Tyrosine-protein kinase receptor.	0.674
ENSLCAP00010006452	ENSLCAP00010048968	ENSLCAP00010006452	ENSLCAP00010048968	Tensin 2b.	Tyrosine-protein kinase receptor.	0.674
ENSLCAP00010006452	LOC108889968	ENSLCAP00010006452	ENSLCAP00010017828	Tensin 2b.	Uncharacterized protein.	0.960
ENSLCAP00010006452	Met	ENSLCAP00010006452	ENSLCAP00010004840	Tensin 2b.	MET proto-oncogene, receptor tyrosine kinase.	0.960
ENSLCAP00010006452	itgbl1	ENSLCAP00010006452	ENSLCAP00010023523	Tensin 2b.	Uncharacterized protein.	0.686
ENSLCAP00010006452	mst1r	ENSLCAP00010006452	ENSLCAP00010039979	Tensin 2b.	Uncharacterized protein.	0.960
ENSLCAP00010019351	ENSLCAP00010047577	ENSLCAP00010019351	ENSLCAP00010047577	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.495
ENSLCAP00010019351	ENSLCAP00010048968	ENSLCAP00010019351	ENSLCAP00010048968	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.495
ENSLCAP00010019351	LOC108889968	ENSLCAP00010019351	ENSLCAP00010017828	Uncharacterized protein.	Uncharacterized protein.	0.959
ENSLCAP00010019351	Met	ENSLCAP00010019351	ENSLCAP00010004840	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.959
ENSLCAP00010019351	mst1r	ENSLCAP00010019351	ENSLCAP00010039979	Uncharacterized protein.	Uncharacterized protein.	0.959
ENSLCAP00010045441	ENSLCAP00010047577	ENSLCAP00010045441	ENSLCAP00010047577	Tensin 1.	Tyrosine-protein kinase receptor.	0.674
ENSLCAP00010045441	ENSLCAP00010048968	ENSLCAP00010045441	ENSLCAP00010048968	Tensin 1.	Tyrosine-protein kinase receptor.	0.674
ENSLCAP00010045441	LOC108889968	ENSLCAP00010045441	ENSLCAP00010017828	Tensin 1.	Uncharacterized protein.	0.960
ENSLCAP00010045441	Met	ENSLCAP00010045441	ENSLCAP00010004840	Tensin 1.	MET proto-oncogene, receptor tyrosine kinase.	0.960
ENSLCAP00010045441	itgbl1	ENSLCAP00010045441	ENSLCAP00010023523	Tensin 1.	Uncharacterized protein.	0.686
ENSLCAP00010045441	mst1r	ENSLCAP00010045441	ENSLCAP00010039979	Tensin 1.	Uncharacterized protein.	0.960
ENSLCAP00010047577	ENSLCAP00010006452	ENSLCAP00010047577	ENSLCAP00010006452	Tyrosine-protein kinase receptor.	Tensin 2b.	0.674
ENSLCAP00010047577	ENSLCAP00010019351	ENSLCAP00010047577	ENSLCAP00010019351	Tyrosine-protein kinase receptor.	Uncharacterized protein.	0.495
ENSLCAP00010047577	ENSLCAP00010045441	ENSLCAP00010047577	ENSLCAP00010045441	Tyrosine-protein kinase receptor.	Tensin 1.	0.674