(10 nodes) Error-prone translesion synthesis, and Delta DNA polymerase complex network (Lates calcarifer)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pold1	DNA polymerase. (1098 aa)
	mad2l2	HORMA domain-containing protein. (210 aa)
	ENSLCAP00010004003	REV3-like, polymerase (DNA directed), zeta, catalytic subunit. (2860 aa)
	pold3	Uncharacterized protein. (446 aa)
	Rev1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1013 aa)
	polh	UmuC domain-containing protein. (738 aa)
	ENSLCAP00010036720	UmuC domain-containing protein. (598 aa)
	pold2	Uncharacterized protein. (471 aa)
	pold4	Uncharacterized protein. (108 aa)
	polk	UmuC domain-containing protein. (887 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010004003	ENSLCAP00010036720	ENSLCAP00010004003	ENSLCAP00010036720	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	UmuC domain-containing protein.	0.964
ENSLCAP00010004003	Pold1	ENSLCAP00010004003	ENSLCAP00010000489	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	DNA polymerase.	0.868
ENSLCAP00010004003	Rev1	ENSLCAP00010004003	ENSLCAP00010014861	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.994
ENSLCAP00010004003	mad2l2	ENSLCAP00010004003	ENSLCAP00010001134	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	HORMA domain-containing protein.	0.999
ENSLCAP00010004003	pold2	ENSLCAP00010004003	ENSLCAP00010053951	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	Uncharacterized protein.	0.988
ENSLCAP00010004003	pold3	ENSLCAP00010004003	ENSLCAP00010007276	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	Uncharacterized protein.	0.979
ENSLCAP00010004003	pold4	ENSLCAP00010004003	ENSLCAP00010055276	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	Uncharacterized protein.	0.621
ENSLCAP00010004003	polh	ENSLCAP00010004003	ENSLCAP00010024082	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	UmuC domain-containing protein.	0.973
ENSLCAP00010004003	polk	ENSLCAP00010004003	ENSLCAP00010060302	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	UmuC domain-containing protein.	0.942
ENSLCAP00010036720	ENSLCAP00010004003	ENSLCAP00010036720	ENSLCAP00010004003	UmuC domain-containing protein.	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	0.964
ENSLCAP00010036720	Pold1	ENSLCAP00010036720	ENSLCAP00010000489	UmuC domain-containing protein.	DNA polymerase.	0.861
ENSLCAP00010036720	Rev1	ENSLCAP00010036720	ENSLCAP00010014861	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.978
ENSLCAP00010036720	mad2l2	ENSLCAP00010036720	ENSLCAP00010001134	UmuC domain-containing protein.	HORMA domain-containing protein.	0.961
ENSLCAP00010036720	pold2	ENSLCAP00010036720	ENSLCAP00010053951	UmuC domain-containing protein.	Uncharacterized protein.	0.743
ENSLCAP00010036720	pold4	ENSLCAP00010036720	ENSLCAP00010055276	UmuC domain-containing protein.	Uncharacterized protein.	0.532
ENSLCAP00010036720	polh	ENSLCAP00010036720	ENSLCAP00010024082	UmuC domain-containing protein.	UmuC domain-containing protein.	0.736
ENSLCAP00010036720	polk	ENSLCAP00010036720	ENSLCAP00010060302	UmuC domain-containing protein.	UmuC domain-containing protein.	0.791
Pold1	ENSLCAP00010004003	ENSLCAP00010000489	ENSLCAP00010004003	DNA polymerase.	REV3-like, polymerase (DNA directed), zeta, catalytic subunit.	0.868
Pold1	ENSLCAP00010036720	ENSLCAP00010000489	ENSLCAP00010036720	DNA polymerase.	UmuC domain-containing protein.	0.861
Pold1	Rev1	ENSLCAP00010000489	ENSLCAP00010014861	DNA polymerase.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.869