STRINGSTRING
Parp2 Parp2 Lmna Lmna ENSLCAP00010005966 ENSLCAP00010005966 ENSLCAP00010005974 ENSLCAP00010005974 casp7 casp7 casp6 casp6 LOC108880527 LOC108880527 parp1 parp1 LOC108886885 LOC108886885 LOC108895937 LOC108895937 ENSLCAP00010056772 ENSLCAP00010056772 lmnb1 lmnb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Parp2Poly [ADP-ribose] polymerase. (658 aa)
LmnaLamin A; Belongs to the intermediate filament family. (671 aa)
ENSLCAP00010005966Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (243 aa)
ENSLCAP00010005974Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (250 aa)
casp7Uncharacterized protein; Belongs to the peptidase C14A family. (316 aa)
casp6Uncharacterized protein; Belongs to the peptidase C14A family. (301 aa)
LOC108880527Uncharacterized protein; Belongs to the intermediate filament family. (595 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
LOC108886885Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (258 aa)
LOC108895937Uncharacterized protein; Belongs to the peptidase C14A family. (273 aa)
ENSLCAP00010056772Poly [ADP-ribose] polymerase. (522 aa)
lmnb1Uncharacterized protein; Belongs to the intermediate filament family. (588 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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