STRINGSTRING
ptger4 ptger4 Ptges Ptges PTGS1 PTGS1 LOC108882313 LOC108882313 ptges2 ptges2 LOC108893582 LOC108893582 Ptgs2 Ptgs2 ptgis ptgis LOC108901740 LOC108901740 ENSLCAP00010030434 ENSLCAP00010030434 LOC108900625 LOC108900625 LOC108898709 LOC108898709 LOC108875662 LOC108875662 LOC108900225 LOC108900225 LOC108875578 LOC108875578 ENSLCAP00010048282 ENSLCAP00010048282 prxl2b prxl2b LOC108900765 LOC108900765 LOC108902731 LOC108902731
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ptger4G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
PtgesProstaglandin E synthase. (203 aa)
PTGS1Prostaglandin-endoperoxide synthase 1. (599 aa)
LOC108882313G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (443 aa)
ptges2Uncharacterized protein; Belongs to the GST superfamily. (381 aa)
LOC108893582Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
Ptgs2Prostaglandin-endoperoxide synthase 2b. (612 aa)
ptgisUncharacterized protein; Belongs to the cytochrome P450 family. (488 aa)
LOC108901740G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)
ENSLCAP00010030434Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family. (564 aa)
LOC108900625G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (373 aa)
LOC108898709G_PROTEIN_RECEP_F1_2 domain-containing protein. (377 aa)
LOC108875662EGF-like domain-containing protein. (595 aa)
LOC108900225CS domain-containing protein. (159 aa)
LOC108875578G_PROTEIN_RECEP_F1_2 domain-containing protein. (379 aa)
ENSLCAP00010048282Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family. (301 aa)
prxl2bUncharacterized protein. (203 aa)
LOC108900765Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
LOC108902731G_PROTEIN_RECEP_F1_2 domain-containing protein. (358 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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