(28 nodes) Mixed, incl. Otospiralin, and Negative regulation of protein neddylation network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010001357	Tyrosine kinase, non-receptor, 2a; Belongs to the protein kinase superfamily. Tyr protein kinase family. (793 aa)
	LOC108885111	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (416 aa)
	LOC108885113	COP9 signalosome subunit 9. (60 aa)
	ENSLCAP00010001416	Otospiralin. (87 aa)
	tnk2	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1220 aa)
	samd11	Uncharacterized protein. (1002 aa)
	ENSLCAP00010012956	Ring finger protein 34b. (330 aa)
	ENSLCAP00010015339	Rho-GAP domain-containing protein. (72 aa)
	tnk1	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (747 aa)
	LOC108900051	Myeloma-overexpressed gene 2 protein homolog. (60 aa)
	ENSLCAP00010026378	PiggyBac transposable element derived 5. (514 aa)
	ENSLCAP00010029648	Rho GTPase activating protein 32b. (1953 aa)
	ttc1	TPR_REGION domain-containing protein. (340 aa)
	ENSLCAP00010033359	Uncharacterized protein. (124 aa)
	Samd7	Sterile alpha motif domain containing 7. (524 aa)
	ENSLCAP00010033412	G protein-coupled receptor 160. (280 aa)
	ENSLCAP00010033607	Uncharacterized protein. (85 aa)
	tespa1	KRAP_IP3R_bind domain-containing protein. (665 aa)
	ptrhd1	Uncharacterized protein. (126 aa)
	tmem260	Uncharacterized protein. (672 aa)
	aig1	Uncharacterized protein. (290 aa)
	LOC108900047	Uncharacterized protein. (162 aa)
	ENSLCAP00010049220	COP9 signalosome subunit 9. (60 aa)
	ENSLCAP00010049648	Uncharacterized protein. (85 aa)
	ENSLCAP00010050098	Uncharacterized protein. (186 aa)
	Rbm33	RNA binding motif protein 33a. (917 aa)
	rnf34	RING-type domain-containing protein. (378 aa)
	hsh2d	SH2 domain-containing protein. (367 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010001416	ENSLCAP00010033412	ENSLCAP00010001416	ENSLCAP00010033412	Otospiralin.	G protein-coupled receptor 160.	0.408
ENSLCAP00010001416	ENSLCAP00010033607	ENSLCAP00010001416	ENSLCAP00010033607	Otospiralin.	Uncharacterized protein.	0.418
ENSLCAP00010001416	ENSLCAP00010049648	ENSLCAP00010001416	ENSLCAP00010049648	Otospiralin.	Uncharacterized protein.	0.418
ENSLCAP00010012956	aig1	ENSLCAP00010012956	ENSLCAP00010046974	Ring finger protein 34b.	Uncharacterized protein.	0.467
ENSLCAP00010012956	tespa1	ENSLCAP00010012956	ENSLCAP00010036314	Ring finger protein 34b.	KRAP_IP3R_bind domain-containing protein.	0.443
ENSLCAP00010026378	ENSLCAP00010050098	ENSLCAP00010026378	ENSLCAP00010050098	PiggyBac transposable element derived 5.	Uncharacterized protein.	0.479
ENSLCAP00010026378	Rbm33	ENSLCAP00010026378	ENSLCAP00010050106	PiggyBac transposable element derived 5.	RNA binding motif protein 33a.	0.479
ENSLCAP00010026378	samd11	ENSLCAP00010026378	ENSLCAP00010010721	PiggyBac transposable element derived 5.	Uncharacterized protein.	0.630
ENSLCAP00010033412	ENSLCAP00010001416	ENSLCAP00010033412	ENSLCAP00010001416	G protein-coupled receptor 160.	Otospiralin.	0.408
ENSLCAP00010033412	LOC108900047	ENSLCAP00010033412	ENSLCAP00010049212	G protein-coupled receptor 160.	Uncharacterized protein.	0.408
ENSLCAP00010033412	Samd7	ENSLCAP00010033412	ENSLCAP00010033379	G protein-coupled receptor 160.	Sterile alpha motif domain containing 7.	0.599
ENSLCAP00010033607	ENSLCAP00010001416	ENSLCAP00010033607	ENSLCAP00010001416	Uncharacterized protein.	Otospiralin.	0.418
ENSLCAP00010033607	LOC108900047	ENSLCAP00010033607	ENSLCAP00010049212	Uncharacterized protein.	Uncharacterized protein.	0.418
ENSLCAP00010049648	ENSLCAP00010001416	ENSLCAP00010049648	ENSLCAP00010001416	Uncharacterized protein.	Otospiralin.	0.418
ENSLCAP00010049648	LOC108900047	ENSLCAP00010049648	ENSLCAP00010049212	Uncharacterized protein.	Uncharacterized protein.	0.418
ENSLCAP00010050098	ENSLCAP00010026378	ENSLCAP00010050098	ENSLCAP00010026378	Uncharacterized protein.	PiggyBac transposable element derived 5.	0.479
ENSLCAP00010050098	Rbm33	ENSLCAP00010050098	ENSLCAP00010050106	Uncharacterized protein.	RNA binding motif protein 33a.	0.944
ENSLCAP00010050098	samd11	ENSLCAP00010050098	ENSLCAP00010010721	Uncharacterized protein.	Uncharacterized protein.	0.473
LOC108900047	ENSLCAP00010033412	ENSLCAP00010049212	ENSLCAP00010033412	Uncharacterized protein.	G protein-coupled receptor 160.	0.408
LOC108900047	ENSLCAP00010033607	ENSLCAP00010049212	ENSLCAP00010033607	Uncharacterized protein.	Uncharacterized protein.	0.418